RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 TUBB2BQ9BVA1 445 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 LRMDAQ9H2I8 198 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 PELI2Q9HAT8 420 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 SLC6A13Q9NSD5 602 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 TBX20Q9UMR3 447 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 EXOGQ9Y2C4 368 aaKnown RBP2.4□□□□□ -2.03
PCM1-208ENST00000518877 PRAG1Q86YV5 1406 aa2.4□□□□□ -2.03
PCM1-208ENST00000518877 TDRD15B5MCY1 1934 aaKnown RBP2.4□□□□□ -2.03
PCM1-208ENST00000518877 USP17L23D6RBM5 183 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ANKRD28O15084 1053 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 WISP2O76076 250 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ZFAND5O76080 213 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 PDE9AO76083 593 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 NR3C1P04150 777 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 IFIT1P09914 478 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 IGHV4-38-2P0DP08 117 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 IL7RP16871 459 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 SHC1P29353 583 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 CDAP32320 146 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ELF1P32519 619 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 RGS2P41220 211 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 HARS2P49590 506 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 KRTAP10-1P60331 282 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 BIRC3Q13489 604 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 PEX6Q13608 980 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ACVR2BQ13705 512 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 CAMK1Q14012 370 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 MYLK3Q32MK0 819 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 KRTCAP3Q53RY4 240 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 CXorf66Q5JRM2 361 aaPredicted RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 FFAR4Q5NUL3 377 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 LCN10Q6JVE6 187 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 SH2D5Q6ZV89 423 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 Q75L30 129 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 RRM2BQ7LG56 351 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 CACNA2D4Q7Z3S7 1137 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ESX1Q8N693 406 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 PPHLN1Q8NEY8 458 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 TRIM63Q969Q1 353 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 RRP36Q96EU6 259 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 PERPQ96FX8 193 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 AGAP3Q96P47 875 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 PSD2Q9BQI7 771 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 RAD21L1Q9H4I0 556 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 SCPEP1Q9HB40 452 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ABI3Q9P2A4 366 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 KLHL8Q9P2G9 620 aaPredicted RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 KLHL9Q9P2J3 617 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 ASIC3Q9UHC3 531 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 INTS6Q9UL03 887 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 CAMK2AQ9UQM7 478 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 LRRFIP2Q9Y608 721 aaKnown RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 ZNF646O15015 1829 aaPredicted RBP2.39□□□□□ -2.03
PCM1-208ENST00000518877 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
PCM1-208ENST00000518877 A0A0G2JNG1 304 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 HS3ST1O14792 307 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 MLYCDO95822 493 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 ATP1A3P13637 1013 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 TYMPP19971 482 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 EPHA8P29322 1005 aaPredicted RBP2.38□□□□□ -2.03
PCM1-208ENST00000518877 ABCD1P33897 745 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 MLLT10P55197 1068 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 CEBPZQ03701 1054 aaKnown RBP2.38□□□□□ -2.03
PCM1-208ENST00000518877 MBTD1Q05BQ5 628 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 KIR2DS5Q14953 304 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 BAK1Q16611 211 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 SNAI3Q3KNW1 292 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 C6orf141Q5SZD1 244 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 PAPD4Q6PIY7 484 aaKnown RBP2.38□□□□□ -2.03
PCM1-208ENST00000518877 MFSD6Q6ZSS7 791 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 DPPA4Q7L190 304 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 LMNTD2Q8IXW0 634 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 ZCCHC10Q8TBK6 192 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 KCNG4Q8TDN1 519 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 IGSF8Q969P0 613 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 NR1H4Q96RI1 486 aaPredicted RBP2.38□□□□□ -2.03
PCM1-208ENST00000518877 PIP5K1AQ99755 562 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 PAIP1Q9H074 479 aaKnown RBP2.38□□□□□ -2.03
PCM1-208ENST00000518877 KCND2Q9NZV8 630 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 MPP6Q9NZW5 540 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 GJD2Q9UKL4 321 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 CRYL1Q9Y2S2 319 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 CYP46A1Q9Y6A2 500 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 FLT1P17948 1338 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 KDM3AQ9Y4C1 1321 aa2.38□□□□□ -2.03
PCM1-208ENST00000518877 A0A1W2PQF6 199 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 H0YIN7 160 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 M0QZ24 198 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 KCNK5O95279 499 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 NADKO95544 446 aaPredicted RBP2.37□□□□□ -2.03
PCM1-208ENST00000518877 AGR2O95994 175 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 TFAP2AP05549 437 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 MCCP23508 829 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 HOXC9P31274 260 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 CCR10P46092 362 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 CCT5P48643 541 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 PPM1FP49593 454 aaPredicted RBP2.37□□□□□ -2.03
PCM1-208ENST00000518877 BMXP51813 675 aa2.37□□□□□ -2.03
PCM1-208ENST00000518877 VAMP2P63027 116 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms