RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TTC14Q96N46 770 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GAD1Q99259 594 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 PCYT2Q99447 389 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SEMA3CQ99985 751 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 NEURL2Q9BR09 285 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SRSF8Q9BRL6 282 aaKnown RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SYT17Q9BSW7 474 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TEX12Q9BXU0 123 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 HRH4Q9H3N8 390 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 EVA1AQ9H8M9 152 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF556Q9HAH1 456 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 PAG1Q9NWQ8 432 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 DNAJB4Q9UDY4 337 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ADD3Q9UEY8 706 aaKnown RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SWAP70Q9UH65 585 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 POU2F3Q9UKI9 436 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 KCNS2Q9ULS6 477 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM5Q9Y2B1 443 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 DLGAP4Q9Y2H0 992 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 OR2A25A4D2G3 310 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 ASPDHA6ND91 283 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 LRRC72A6NJI9 287 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 B4DLN1 442 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 ANKRD66B4E2M5 251 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PRAC2D3DTV9 90 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PAPSS1O43252 624 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-207ENST00000518569 WDR1O75083 606 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 LDB3O75112 727 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 KRT36O76013 467 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 FAM106CPP0CH98 169 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 CDH1P12830 882 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 KCNA5P22460 613 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 HRH2P25021 359 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 SLC15A1P46059 708 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 MRPL12P52815 198 aaKnown RBP3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PNLIPRP2P54317 469 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 MFAP4P55083 255 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 KCNC3Q14003 757 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 RAB6CQ53S08 254 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 TMEM198Q66K66 360 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 RUSC1-AS1Q66K80 236 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 CLEC17AQ6ZS10 378 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PLEKHM3Q6ZWE6 761 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 ATG9AQ7Z3C6 839 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GALNT5Q7Z7M9 940 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 SCYL3Q8IZE3 742 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 TAGAPQ8N103 731 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 C17orf53Q8N3J3 647 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-207ENST00000518569 RASGEF1CQ8N431 466 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 RFLNBQ8N5W9 214 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 CALML4Q96GE6 196 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GFI1Q99684 422 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 RAB6CQ9H0N0 254 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 TCP11L1Q9NUJ3 509 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 WWOXQ9NZC7 414 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PASKQ96RG2 1323 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 PRAG1Q86YV5 1406 aa3.58□□□□□ -1.84
VPS13B-207ENST00000518569 ZCWPW2A0A1B0GU75 182 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 ZNHIT1O43257 154 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF217O75362 1048 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 KCNK5O95279 499 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 SELLP14151 372 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 POLR2CP19387 275 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 ACSL1P33121 698 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 FUT6P51993 359 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 TERF1P54274 439 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 ERVFC1-1P60608 527 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 PITX1P78337 314 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 STK4Q13043 487 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 C15orf59Q2T9L4 293 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 IRAK1BP1Q5VVH5 260 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 ZDHHC20Q5W0Z9 365 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 KRT79Q5XKE5 535 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 Q75L30 129 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 TMPRSS12Q86WS5 348 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 DCP1BQ8IZD4 617 aaKnown RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 SLC5A8Q8N695 610 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 POC5Q8NA72 575 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 GSDMBQ8TAX9 411 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 PPP4R1Q8TF05 950 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 SLC38A5Q8WUX1 472 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 TMEM255BQ8WV15 326 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 SECTM1Q8WVN6 248 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 SLC44A1Q8WWI5 657 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 JAKMIP2Q96AA8 810 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 PKP4Q99569 1192 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 OSGEPL1Q9H4B0 414 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 RAD21L1Q9H4I0 556 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 PSD3Q9NYI0 1048 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 WSB2Q9NYS7 404 aaPredicted RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 RCC2Q9P258 522 aaKnown RBP3.57□□□□□ -1.84
VPS13B-207ENST00000518569 AMACRQ9UHK6 382 aa3.57□□□□□ -1.84
VPS13B-207ENST00000518569 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms