RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 SLC30A1Q9Y6M5 507 aa18.4■□□□□ 0.54
FAM49B-208ENST00000518344 CCDC78A2IDD5 438 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 OR2AG2A6NM03 316 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 SRRM3A6NNA2 597 aaPredicted RBP18.39■□□□□ 0.53
FAM49B-208ENST00000518344 PDZK1P1A8MUH7 402 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 BRINP1O60477 761 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 SUN1O94901 812 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 APRTP07741 180 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 F3P13726 295 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 SLC2A4P14672 509 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 VCLP18206 1134 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 ITGALP20701 1170 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 MC4RP32245 332 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 GRIA1P42261 906 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 GPR3P46089 330 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 CLCNKAP51800 687 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 PDX1P52945 283 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 CTSCP53634 463 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 INHBCP55103 352 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 NFATC2Q13469 925 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 KCTD19Q17RG1 926 aaPredicted RBP18.39■□□□□ 0.53
FAM49B-208ENST00000518344 CCDC38Q502W7 563 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 C3orf38Q5JPI3 329 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 ZNF438Q7Z4V0 828 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 B3GNT8Q7Z7M8 397 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 ZNF761Q86XN6 746 aaPredicted RBP18.39■□□□□ 0.53
FAM49B-208ENST00000518344 RASGEF1CQ8N431 466 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 STN1Q9H668 368 aaKnown RBP18.39■□□□□ 0.53
FAM49B-208ENST00000518344 POLR1BQ9H9Y6 1135 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 RDH14Q9HBH5 336 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 EPB41L5Q9HCM4 733 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 NLE1Q9NVX2 485 aaPredicted RBP18.39■□□□□ 0.53
FAM49B-208ENST00000518344 SMOXQ9NWM0 555 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 KCNK4Q9NYG8 393 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 SATB2Q9UPW6 733 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 RAXQ9Y2V3 346 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 WDFY3Q8IZQ1 3526 aa18.39■□□□□ 0.53
FAM49B-208ENST00000518344 A6NCN8 305 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 USP27XA6NNY8 438 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 TMX2-CTNND1H3BSU7 103 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 AGRPO00253 132 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 POP7O75817 140 aaKnown RBP18.38■□□□□ 0.53
FAM49B-208ENST00000518344 IDSP22304 550 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 RPL10P27635 214 aaKnown RBP18.38■□□□□ 0.53
FAM49B-208ENST00000518344 FASLGP48023 281 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 LSSP48449 732 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 HHEXQ03014 270 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 NR1D2Q14995 579 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 MAP9Q49MG5 647 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 ZRANB3Q5FWF4 1079 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 FNBP1LQ5T0N5 605 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 NKAIN2Q5VXU1 208 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 SNX20Q7Z614 316 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 SLC9B2Q86UD5 537 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 PIM3Q86V86 326 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 AMZ2Q86W34 360 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 STYXQ8WUJ0 223 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 ULK4Q96C45 1275 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 SGF29Q96ES7 293 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 DCUN1D1Q96GG9 259 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 TMEM74Q96NL1 305 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 C19orf43Q9BQ61 176 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 STRADBQ9C0K7 418 aa18.38■□□□□ 0.53
FAM49B-208ENST00000518344 GOLGA4Q13439 2230 aaKnown RBP18.38■□□□□ 0.53
FAM49B-208ENST00000518344 TPRP12270 2363 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 KIR2DS5A0A0G2JLQ3 304 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 A0A0G2JNG1 304 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 OR5K4A6NMS3 321 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 KIR2DS3K7RE56 304 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 CPNE6O95741 557 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 CD1CP29017 333 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 PBLDP30039 288 aaPredicted RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 TERF1P54274 439 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 DRG2P55039 364 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 BASP1P80723 227 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 KIR2DS5Q14953 304 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 TRIP13Q15645 432 aaPredicted RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 SKIDA1Q1XH10 827 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 C4orf22Q6V702 233 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 MICALCLQ6ZW33 695 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 TAS2R42Q7RTR8 314 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 C11orf96Q7Z7L8 435 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 BEND7Q8N7W2 519 aaPredicted RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 WDR36Q8NI36 951 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 NAT14Q8WUY8 206 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 MAGOHBQ96A72 148 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 SH3KBP1Q96B97 665 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 CDKN2AIPNLQ96HQ2 116 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 OSBPL9Q96SU4 736 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 NAP1L3Q99457 506 aaPredicted RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 SARS2Q9NP81 518 aaKnown RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 CASS4Q9NQ75 786 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 SMARCAL1Q9NZC9 954 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 SCHIP1Q9P0W5 487 aaPredicted RBP18.37■□□□□ 0.53
FAM49B-208ENST00000518344 CPNE7Q9UBL6 633 aa18.37■□□□□ 0.53
FAM49B-208ENST00000518344 IGHV1OR21-1A0A087WYE8 117 aa18.36■□□□□ 0.53
FAM49B-208ENST00000518344 CCDC187A0A096LP49 1063 aa18.36■□□□□ 0.53
FAM49B-208ENST00000518344 KCNJ13O60928 360 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms