RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 LIPIQ6XZB0 460 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 MMAAQ8IVH4 418 aaKnown RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 NKAPQ8N5F7 415 aaKnown RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 TMIEQ8NEW7 156 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 RHEBL1Q8TAI7 183 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 MAPK15Q8TD08 544 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 ILKAPQ9H0C8 392 aaPredicted RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 CDH19Q9H159 772 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 PRSS16Q9NQE7 514 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 ZDHHC3Q9NYG2 299 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 EPHX1P07099 455 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 IDH3AP50213 366 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 GALK1P51570 392 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 ZBTB16Q05516 673 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 CLNKQ7Z7G1 428 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 UCMAQ8WVF2 138 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 SUSD6Q92537 303 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 RIOK2Q9BVS4 552 aaKnown RBP23.1■■□□□ 1.29
SLIT3-204ENST00000518140 GNPTGQ9UJJ9 305 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 ZFP69BQ9UJL9 534 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 RAP2CQ9Y3L5 183 aa23.1■■□□□ 1.29
SLIT3-204ENST00000518140 H3BQ06 376 aaPredicted RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 BTN3A1O00481 513 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 MTX2O75431 263 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 TUBB3Q13509 450 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 FBXO48Q5FWF7 155 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 CFAP157Q5JU67 520 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 TECPR1Q7Z6L1 1165 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 EZH1Q92800 747 aaPredicted RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 FUBP1Q96AE4 644 aaKnown RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 EBF2Q9HAK2 575 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 TNFRSF12AQ9NP84 129 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 NPHS1O60500 1241 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 SIX3O95343 332 aaPredicted RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 TSPAN8P19075 237 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 IMPDH1P20839 514 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 ITGB7P26010 798 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 EIF2DP41214 584 aaKnown RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 ATP6V0D1P61421 351 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 HTR4Q13639 388 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 PFKFB4Q16877 469 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 GPRC6AQ5T6X5 926 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 MACC1Q6ZN28 852 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 PIWIL4Q7Z3Z4 852 aaKnown RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 PTGR2Q8N8N7 351 aaPredicted RBP23.09■■□□□ 1.29
SLIT3-204ENST00000518140 STAG3L4Q8TBR4 150 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 CCDC126Q96EE4 140 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 RILPQ96NA2 401 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 COPS8Q99627 209 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 NMUR2Q9GZQ4 415 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 COG4Q9H9E3 785 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 COQ6Q9Y2Z9 468 aa23.09■■□□□ 1.29
SLIT3-204ENST00000518140 PLXNB3Q9ULL4 1909 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 TMEM233B4DJY2 109 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 F8W8V4 182 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 TPBGLP0DKB5 382 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 T-ENOLP0DO92 83 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 ALOX15P16050 662 aaPredicted RBP23.08■■□□□ 1.29
SLIT3-204ENST00000518140 ASPHQ12797 758 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 COL19A1Q14993 1142 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 AAK1Q2M2I8 961 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 UNC50Q53HI1 259 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 ZDHHC20Q5W0Z9 365 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 ERAP2Q6P179 960 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 TLDC1Q6P9B6 456 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 DET1Q7L5Y6 550 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 WWP1Q9H0M0 922 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 ARMCX1Q9P291 453 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 RNF112Q9ULX5 631 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 TRIM33Q9UPN9 1127 aa23.08■■□□□ 1.29
SLIT3-204ENST00000518140 TRIOBPQ9H2D6 2365 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 FADS2P1A8MWK0 482 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 FCHO1O14526 889 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 KERAO60938 352 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 APODP05090 189 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 KRT16P08779 473 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 ELFN1P0C7U0 828 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 RPL14P50914 215 aaKnown RBP23.07■■□□□ 1.28
SLIT3-204ENST00000518140 HK3P52790 923 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 KHDC1Q4VXA5 237 aaKnown RBP23.07■■□□□ 1.28
SLIT3-204ENST00000518140 ZNF678Q5SXM1 525 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 ZNF648Q5T619 568 aaPredicted RBP23.07■■□□□ 1.28
SLIT3-204ENST00000518140 UGT3A1Q6NUS8 523 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 FBXL19Q6PCT2 694 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 SLC22A9Q8IVM8 553 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 INPP5DQ92835 1189 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 CNDP1Q96KN2 507 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 GSTO2Q9H4Y5 243 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 EPS15L1Q9UBC2 864 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 STON1Q9Y6Q2 735 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 IGLV3-16A0A075B6K0 115 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 GRID2O43424 1007 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 SMIM24O75264 130 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 CBX6O95503 412 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 NSG1P42857 185 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 ACOX1Q15067 660 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 SLC9B1Q4ZJI4 515 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 ACSBG2Q5FVE4 666 aa23.07■■□□□ 1.28
SLIT3-204ENST00000518140 HENMT1Q5T8I9 393 aaKnown RBP23.07■■□□□ 1.28
SLIT3-204ENST00000518140 TXNDC11Q6PKC3 985 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms