RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SMARCE1Q969G3 411 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 TFB2MQ9H5Q4 396 aaKnown RBP3.66□□□□□ -1.82
LINC01088-211ENST00000515597 MAGIXQ9H6Y5 334 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 SLC28A3Q9HAS3 691 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 SCPEP1Q9HB40 452 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 PCDHB16Q9NRJ7 776 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 TCP11L1Q9NUJ3 509 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 MARCH4Q9P2E8 410 aaPredicted RBP3.66□□□□□ -1.82
LINC01088-211ENST00000515597 UBA2Q9UBT2 640 aaPredicted RBP3.66□□□□□ -1.82
LINC01088-211ENST00000515597 OR14J1Q9UGF5 321 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 SOGA1O94964 1423 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 PCF11O94913 1555 aaKnown RBP3.66□□□□□ -1.82
LINC01088-211ENST00000515597 DNMBPQ6XZF7 1577 aa3.66□□□□□ -1.82
LINC01088-211ENST00000515597 MAGI1Q96QZ7 1491 aaPredicted RBP3.66□□□□□ -1.82
LINC01088-211ENST00000515597 NUP160Q12769 1436 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 OR5K3A6NET4 321 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 NPIPB15A6NHN6 443 aaPredicted RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 J3KRW8 73 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 TGFB1I1O43294 461 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 EPB41L2O43491 1005 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 PCDH7O60245 1069 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 CTSVO60911 334 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 NKX2-2O95096 273 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 PATE4P0C8F1 98 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 HSPA1AP0DMV8 641 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 HSPA1BP0DMV9 641 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 CSF2RAP15509 400 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ICAM3P32942 547 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 AMPHP49418 695 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 CCR9P51686 369 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 RPL7AP62424 266 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 CCNG2Q16589 344 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 SOWAHCQ53LP3 525 aaPredicted RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 WDR38Q5JTN6 314 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 SFMBT2Q5VUG0 894 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 DIS3L2Q8IYB7 885 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF248Q8NDW4 579 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ETNPPLQ8TBG4 499 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 FAM149B1Q96BN6 582 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF354BQ96LW1 612 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 MAP7D2Q96T17 732 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 PIP5K1AQ99755 562 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 SIL1Q9H173 461 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 UPF2Q9HAU5 1272 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 MAP3K20Q9NYL2 800 aaKnown RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 DLGAP2Q9P1A6 1054 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF624Q9P2J8 865 aaPredicted RBP3.65□□□□□ -1.83
LINC01088-211ENST00000515597 MAU2Q9Y6X3 613 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 ADAMTSL3P82987 1691 aa3.65□□□□□ -1.83
LINC01088-211ENST00000515597 KIAA1210Q9ULL0 1709 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 A0A1W2PQF6 199 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 BLOC1S5-TXNDC5H3BN57 136 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 JRKO75564 520 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 PDE9AO76083 593 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM63AO94886 807 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 CCNDBP1O95273 360 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 BAG4O95429 457 aaKnown RBP3.64□□□□□ -1.83
LINC01088-211ENST00000515597 OLR1P78380 273 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 COG7P83436 770 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 GOLGA8DPQ0D2H9 430 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 DPCR1Q3MIW9 517 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 RAB6CQ53S08 254 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 CPLX4Q7Z7G2 160 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 CNTROBQ8N137 903 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 ADAD2Q8NCV1 583 aaKnown RBP3.64□□□□□ -1.83
LINC01088-211ENST00000515597 TRIM58Q8NG06 486 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 TM9SF4Q92544 642 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 PHF21AQ96BD5 680 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 INTS12Q96CB8 462 aaKnown RBP3.64□□□□□ -1.83
LINC01088-211ENST00000515597 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 C7orf26Q96N11 449 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 RAB6CQ9H0N0 254 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 LRMDAQ9H2I8 198 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF69Q9UC07 566 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 CNOT8Q9UFF9 292 aaKnown RBP3.64□□□□□ -1.83
LINC01088-211ENST00000515597 KCNK7Q9Y2U2 307 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 CLIC4Q9Y696 253 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
LINC01088-211ENST00000515597 LTBP4Q8N2S1 1624 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 PRG4Q92954 1404 aaPredicted RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 GRIN2BQ13224 1484 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 C1orf226A1L170 272 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 C5orf60A6NFR6 353 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 SMIM1B2RUZ4 78 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 BUD23O43709 281 aaKnown RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 CRLF1O75462 422 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 MBD4O95243 580 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 SPARCP09486 303 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 BSGP35613 385 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 DRG2P55039 364 aaKnown RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 F2RL1P55085 397 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 ZBED6P86452 979 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 MPP1Q00013 466 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM115Q12893 351 aaPredicted RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 CSTF3Q12996 717 aaKnown RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 SLC1A5Q15758 541 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 Q75L30 129 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 APLFQ8IW19 511 aaPredicted RBP3.63□□□□□ -1.83
LINC01088-211ENST00000515597 ADSSL1Q8N142 457 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 TEX19Q8NA77 164 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms