RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 FDCSPQ8NFU4 85 aa19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 SEC14L1Q92503 715 aa19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 PKD2L2Q9NZM6 624 aa19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 DNPEPQ9ULA0 475 aa19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 FARSAQ9Y285 508 aaKnown RBP19.97■□□□□ 0.79
SQSTM1-215ENST00000514093 DOPEY1Q5JWR5 2465 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 A6NL46 340 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 MTA2O94776 668 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 SLC25A14O95258 325 aaPredicted RBP19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 EBLN1P0CF75 366 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 IL4RP24394 825 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 NR6A1Q15406 480 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 ANKRD20A8PQ5CZ79 823 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 SLC6A19Q695T7 634 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 RBMXL3Q8N7X1 1067 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 LRRN4Q8WUT4 740 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 NUDT9Q9BW91 350 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 SPATA16Q9BXB7 569 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 PCDH9Q9HC56 1237 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 TRIM39Q9HCM9 518 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 SLC40A1Q9NP59 571 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 RBM22Q9NW64 420 aaKnown RBP eCLIP19.96■□□□□ 0.791e-7■■■■■ 34.8
SQSTM1-215ENST00000514093 ABCA12Q86UK0 2595 aa19.96■□□□□ 0.79
SQSTM1-215ENST00000514093 ZNF185O15231 689 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 DPM1O60762 260 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 MTX2O75431 263 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 RARAP10276 462 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 FERP16591 822 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 ZNF7P17097 686 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 POU3F2P20265 443 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 SERPINB6P35237 376 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 NIPAL4Q0D2K0 466 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 QPCTQ16769 361 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 FAM69BQ5VUD6 431 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 C1QL3Q5VWW1 255 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 IRF2BP2Q7Z5L9 587 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 RAVER1Q8IY67 606 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 ARRDC2Q8TBH0 407 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 ENOX1Q8TC92 643 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 CCHCR1Q8TD31 782 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 MR1Q95460 341 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 EID2BQ96D98 161 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 CXorf40BQ96DE9 158 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 LYSMD1Q96S90 227 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 SYT11Q9BT88 431 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 POT1Q9NUX5 634 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 FANCLQ9NW38 375 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 MYO1AQ9UBC5 1043 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 EPHA6Q9UF33 1036 aa19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 ANKRD17O75179 2603 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-215ENST00000514093 CEACAM4O75871 244 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 ATP1A3P13637 1013 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 PCK1P35558 622 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 UBXN1Q04323 297 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 BOLA3Q53S33 107 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 CYB5D1Q6P9G0 228 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 TTC30BQ8N4P2 665 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 SLC41A2Q96JW4 573 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 MLPHQ9BV36 600 aaPredicted RBP19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 PCDH18Q9HCL0 1135 aa19.94■□□□□ 0.78
SQSTM1-215ENST00000514093 CHUKO15111 745 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 KMOO15229 486 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 FTLP02792 175 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 LPOP22079 712 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 PDE1BQ01064 536 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 MMRN1Q13201 1228 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 RAPSNQ13702 412 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 ZNF569Q5MCW4 686 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 ALG1LQ6GMV1 187 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 LCN10Q6JVE6 187 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 ABRAXAS1Q6UWZ7 409 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 LRRTM4Q86VH4 590 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 ZNF547Q8IVP9 402 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 RHOT1Q8IXI2 618 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 GPR26Q8NDV2 337 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 PNPLA2Q96AD5 504 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 SNRNP40Q96DI7 357 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 C5orf34Q96MH7 638 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 FCRL4Q96PJ5 515 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 MAP3K3Q99759 626 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 FGF21Q9NSA1 209 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 WDR37Q9Y2I8 494 aa19.93■□□□□ 0.78
SQSTM1-215ENST00000514093 RGSL1A5PLK6 1076 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 MFSD11O43934 449 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 TMEM63AO94886 807 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 CBX6O95503 412 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 CCDC172P0C7W6 258 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 ARL4DP49703 201 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 ZNF165P49910 485 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 GPS2Q13227 327 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 CT47A1Q5JQC4 288 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 FAM182AQ5T1J6 154 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 SLC38A9Q8NBW4 561 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 ADAMTS17Q8TE56 1095 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 UBXN4Q92575 508 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 MAML1Q92585 1016 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 ZNF514Q96K75 400 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 PHF12Q96QT6 1004 aa19.92■□□□□ 0.78
SQSTM1-215ENST00000514093 RAB33BQ9H082 229 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms