RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 LBPP18428 481 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 BRCC3P46736 316 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 CYBRD1Q53TN4 286 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 PCID2Q5JVF3 399 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 PIM3Q86V86 326 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 MFSD2AQ8NA29 543 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 PDPRQ8NCN5 879 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 NODALQ96S42 347 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 HOPXQ9BPY8 73 aaPredicted RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 ASPSCR1Q9BZE9 553 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TOR3AQ9H497 397 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 NUDT5Q9UKK9 219 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TSPAN3O60637 253 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 FMO3P31513 532 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 MAGEA12P43365 314 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 MAP2K4P45985 399 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 CCT8P50990 548 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 NRG1Q02297 640 aaPredicted RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 LAPTM4AQ15012 233 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ATP6AP1LQ52LC2 224 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ZNF789Q5FWF6 425 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 PM20D1Q6GTS8 502 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 AGMOQ6ZNB7 445 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 NDNFQ8TB73 568 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 BIRC7Q96CA5 298 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 CCDC126Q96EE4 140 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ARMC1Q9NVT9 282 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ACTR3BQ9P1U1 418 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ERVK-11Q9UQG0 969 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TMEM98Q9Y2Y6 226 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 LOC100506127A0A0U1RQW1 187 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CCNKO75909 580 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CST1P01037 141 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 UGT2B4P06133 528 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 GPIP06744 558 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CCNCP24863 283 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 RFC2P35250 354 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 GRIK1P39086 918 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 ATP6V0D1P61421 351 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 PHKG1Q16816 387 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 UPP1Q16831 310 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 FAM98BQ52LJ0 330 aaKnown RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 TSTD2Q5T7W7 516 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 DEPDC1Q5TB30 811 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 OVOS1Q6IE37 1185 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 PKN3Q6P5Z2 889 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 LGI2Q8N0V4 545 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 OR13F1Q8NGS4 319 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 MCFD2Q8NI22 146 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 HMGCLL1Q8TB92 370 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 GIPC2Q8TF65 315 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CSNK1G1Q9HCP0 422 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 DOCK3Q8IZD9 2030 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 A0A087X1B8 175 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 G3V2T6 193 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 AZIN1O14977 448 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 ALDOCP09972 364 aaKnown RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 CCR1P32246 355 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 GEMP55040 296 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 ARPP19P56211 112 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 HUNKP57058 714 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 INAVAQ3KP66 663 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 ATAD3BQ5T9A4 648 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 FAM45BPQ6NSW5 357 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 SPATA2LQ8IUW3 424 aaPredicted RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 CLYBLQ8N0X4 340 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 FNDC5Q8NAU1 212 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 FAM45AQ8TCE6 357 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.56□□□□□ -0.88
VCAN-210ENST00000513960 ROPN1LQ96C74 230 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 NSUN5Q96P11 429 aaKnown RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 ABCC13Q9NSE7 274 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CD300AQ9UGN4 299 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 NOX1Q9Y5S8 564 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 OR51F1A6NGY5 319 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 ARSFP54793 590 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 NCS1P62166 190 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 YBX1P67809 324 aaKnown RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 ZNF33AQ06730 810 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 TRIP4Q15650 581 aaPredicted RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 UBE2UQ5VVX9 321 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 SCML4Q8N228 414 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 SCAMP5Q8TAC9 235 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CNIH3Q8TBE1 160 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 S100ZQ8WXG8 99 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 FEM1CQ96JP0 617 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 CEP19Q96LK0 163 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 SLC30A3Q99726 388 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 KIFC1Q9BW19 673 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 C1QTNF1Q9BXJ1 281 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 GLOD4Q9HC38 313 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 MRGBPQ9NV56 204 aa9.56□□□□□ -0.88
VCAN-210ENST00000513960 INTS7Q9NVH2 962 aaKnown RBP9.56□□□□□ -0.88
VCAN-210ENST00000513960 RBM22Q9NW64 420 aaKnown RBP eCLIP9.56□□□□□ -0.88
VCAN-210ENST00000513960 PCDHGA3Q9Y5H0 932 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms