RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 DTLQ9NZJ0 730 aa10.99□□□□□ -0.65
RNF4-218ENST00000513284 ATXN10Q9UBB4 475 aa10.99□□□□□ -0.65
RNF4-218ENST00000513284 TCFL5Q9UL49 500 aa10.99□□□□□ -0.65
RNF4-218ENST00000513284 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
RNF4-218ENST00000513284 PCNX1Q96RV3 2341 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 NAV3Q8IVL0 2385 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 HEATR9A2RTY3 570 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 MASP2O00187 686 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 GFPT2O94808 682 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 VIPP01282 170 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 CCDC172P0C7W6 258 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 SLC2A4P14672 509 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 SOX5P35711 763 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 CAPZBP47756 277 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 GLRBP48167 497 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 VAV2P52735 878 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 GSCP56915 257 aaPredicted RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 POLR2FP61218 127 aaKnown RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 ATP1A4Q13733 1029 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 GPR18Q14330 331 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 IRGCQ6NXR0 463 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ABRAXAS1Q6UWZ7 409 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 SPOCD1Q6ZMY3 1216 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 CLEC17AQ6ZS10 378 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 Q6ZS92 163 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 MED25Q71SY5 747 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ENDOVQ8N8Q3 282 aaKnown RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 TMEM102Q8N9M5 508 aaPredicted RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 SIDT2Q8NBJ9 832 aaKnown RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 ZDHHC12Q96GR4 267 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 ZNF599Q96NL3 588 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 MGME1Q9BQP7 344 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ZNF552Q9H707 407 aaPredicted RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ARFGAP3Q9NP61 516 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 WASH6PQ9NQA3 447 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 FGF21Q9NSA1 209 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 FAM207AQ9NSI2 230 aaPredicted RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 SAMSN1Q9NSI8 373 aaKnown RBP10.98□□□□□ -0.65
RNF4-218ENST00000513284 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 TAB2Q9NYJ8 693 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 ADAM22Q9P0K1 906 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 CSAG2Q9Y5P2 127 aa10.98□□□□□ -0.65
RNF4-218ENST00000513284 SPTBP11277 2137 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 ZGRF1Q86YA3 2104 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 A0A0J9YYE9 177 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 OR52A4PA6NMU1 304 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 MEN1O00255 615 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 EEF2KO00418 725 aaKnown RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 DIAPH2O60879 1101 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 CLDN7O95471 211 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 PRLP01236 227 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 JCHAINP01591 159 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 TRBC1P01850 177 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 RAB40ALP0C0E4 278 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 HTR7P34969 479 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 AIF1P55008 147 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 KRTAP10-9P60411 292 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 LLGL1Q15334 1064 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 HENMT1Q5T8I9 393 aaKnown RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 ARMC12Q5T9G4 340 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 VWA5B1Q5TIE3 1220 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 PPP1R2P3Q6NXS1 205 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 SPNS3Q6ZMD2 512 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 RFX8Q6ZV50 586 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 CYP4V2Q6ZWL3 525 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 USP45Q70EL2 814 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 BPHLQ86WA6 291 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 D2HGDHQ8N465 521 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 AVL9Q8NBF6 648 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 ZNF501Q96CX3 271 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 ZNF514Q96K75 400 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 PEBP4Q96S96 227 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 MAP3K3Q99759 626 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 MLPHQ9BV36 600 aaPredicted RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 NLNQ9BYT8 704 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 CARD9Q9H257 536 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 VPS16Q9H269 839 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
RNF4-218ENST00000513284 COPG2Q9UBF2 871 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 SVILO95425 2214 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 PKDREJQ9NTG1 2253 aa10.97□□□□□ -0.65
RNF4-218ENST00000513284 MAFKO60675 156 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 SCRG1O75711 98 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 PYGLP06737 847 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 STSP08842 583 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 HOXB4P17483 251 aaPredicted RBP10.96□□□□□ -0.65
RNF4-218ENST00000513284 RORAP35398 523 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 PDE1BQ01064 536 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 ART3Q13508 389 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 GPR19Q15760 415 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 DNAJC24Q6P3W2 148 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 PHF13Q86YI8 300 aaPredicted RBP10.96□□□□□ -0.65
RNF4-218ENST00000513284 TMEM151BQ8IW70 566 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 DSELQ8IZU8 1212 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms