RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 KNTC1P50748 2209 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 TPRP12270 2363 aaKnown RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 MROH6A6NGR9 719 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 OR2AG2A6NM03 316 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 AGRPO00253 132 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 PPM1DO15297 605 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 NUDT21O43809 227 aaKnown RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 GAS8O95995 478 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 ITGALP20701 1170 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 ARSDP51689 593 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 SESN2P58004 480 aaPredicted RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 ISXQ2M1V0 245 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 ZRANB3Q5FWF4 1079 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 TMEM220Q6QAJ8 160 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 SPRED1Q7Z699 444 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 ACTRT1Q8TDG2 376 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 ATXN7L3BQ96GX2 97 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 GFM1Q96RP9 751 aaKnown RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 NAP1L3Q99457 506 aaPredicted RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 ZCCHC2Q9C0B9 1178 aaKnown RBP13.77□□□□□ -0.21
DDX41-212ENST00000511040 CHD8Q9HCK8 2581 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 SLC2A6Q9UGQ3 507 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 SLC30A1Q9Y6M5 507 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 CEP295Q9C0D2 2601 aa13.77□□□□□ -0.21
DDX41-212ENST00000511040 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 A6NCN8 305 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 OR51F1A6NGY5 319 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 NTN3O00634 580 aaPredicted RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 B4GAT1O43505 415 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 POP7O75817 140 aaKnown RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 KRT14P02533 472 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 HADHAP40939 763 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 PDX1P52945 283 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 CRADDP78560 199 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 B4GALNT1Q00973 533 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 GPS1Q13098 491 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 NKAIN2Q5VXU1 208 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 IYDQ6PHW0 289 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 USP53Q70EK8 1073 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 ZNF438Q7Z4V0 828 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 SNX20Q7Z614 316 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 C11orf96Q7Z7L8 435 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 B3GNT8Q7Z7M8 397 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 NXPE1Q8N323 547 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 SFRP1Q8N474 314 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 STYXQ8WUJ0 223 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 ULK4Q96C45 1275 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 DCUN1D1Q96GG9 259 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 CDKN2AIPNLQ96HQ2 116 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 TIMM29Q9BSF4 260 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 CCDC86Q9H6F5 360 aaKnown RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 EIF2B3Q9NR50 452 aaKnown RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 SCHIP1Q9P0W5 487 aaPredicted RBP13.76□□□□□ -0.21
DDX41-212ENST00000511040 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 ENTPD2Q9Y5L3 495 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 AK5Q9Y6K8 562 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 ACACBO00763 2458 aa13.76□□□□□ -0.21
DDX41-212ENST00000511040 BPTFQ12830 3046 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 CCDC162PA2VCL2 907 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 PDZK1P1A8MUH7 402 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 D6RAR5 112 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 PHF2O75151 1096 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 TCEA3O75764 348 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 MPOP05164 745 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 F3P13726 295 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 PNLIPP16233 465 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 PPM1FP49593 454 aaPredicted RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 DRG2P55039 364 aaKnown RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 CYP1B1Q16678 543 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 SKIDA1Q1XH10 827 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 TSTD2Q5T7W7 516 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 CCDC137Q6PK04 289 aaKnown RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 C4orf22Q6V702 233 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 FAM83HQ6ZRV2 1179 aaPredicted RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 SERPINA9Q86WD7 417 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
DDX41-212ENST00000511040 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 ZNF778Q96MU6 729 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 RDH14Q9HBH5 336 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
DDX41-212ENST00000511040 PRAMEF33A0A0G2JMD5 474 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
DDX41-212ENST00000511040 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 TAF4O00268 1085 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CES2O00748 559 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CAPNS1P04632 268 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms