RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 SPOCD1Q6ZMY3 1216 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 TMEM26Q6ZUK4 368 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 B4GALNT4Q76KP1 1039 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 PID1Q7Z2X4 250 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 RBM12BQ8IXT5 1001 aaKnown RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 NLGN4XQ8N0W4 816 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 NLGN4YQ8NFZ3 816 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 CALR3Q96L12 384 aaKnown RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 CATSPER2Q96P56 530 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 FCRL5Q96RD9 977 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 SPRY4Q9C004 299 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 LUC7LQ9NQ29 371 aaKnown RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 WASH6PQ9NQA3 447 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 UBP1Q9NZI7 540 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 KLHL8Q9P2G9 620 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 SLC23A2Q9UGH3 650 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 HACD1B0YJ81 288 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 SLC28A2O43868 658 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 UBXN7O94888 489 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 C9P02748 559 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 ANKRD34CP0C6C1 535 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 LIFP15018 202 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 WNT3AP56704 352 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 CYP4F2P78329 520 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 KCNC4Q03721 635 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 WASHC5Q12768 1159 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 NFATC3Q12968 1075 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 SPA17Q15506 151 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 ATP13A5Q4VNC0 1218 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 SIRPB2Q5JXA9 342 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 BORAQ6PGQ7 559 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 CRTC3Q6UUV7 619 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 ZC3H18Q86VM9 953 aaKnown RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 RNF214Q8ND24 703 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 GDAP1Q8TB36 358 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 PMEPA1Q969W9 287 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 RTP4Q96DX8 246 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 FERMT1Q9BQL6 677 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 ADNPQ9H2P0 1102 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 BPIFA1Q9NP55 256 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 STARD5Q9NSY2 213 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 GEMIN8Q9NWZ8 242 aaKnown RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 ZNF624Q9P2J8 865 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 TMEM184BQ9Y519 407 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 SPO11Q9Y5K1 396 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 DNMT3AQ9Y6K1 912 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-206ENST00000509468 AHCTF1Q8WYP5 2266 aa12.44□□□□□ -0.42
KDM3B-206ENST00000509468 PIEZO2Q9H5I5 2752 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 PDZK1P1A8MUH7 402 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 AURKAO14965 403 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 LCA5LO95447 670 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 FAM87AP0C7U9 286 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 PECAM1P16284 738 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ITGB6P18564 788 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 NFKB1P19838 968 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 HLA-DPA1P20036 260 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 SLC19A1P41440 591 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 HALP42357 657 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ABHD18Q0P651 414 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 MPP3Q13368 585 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 XRCC4Q13426 336 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 LDLRAP1Q5SW96 308 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 FAM182AQ5T1J6 154 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 KDELC1Q6UW63 502 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 CCDC50Q8IVM0 306 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ZNF547Q8IVP9 402 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 CCDC170Q8IYT3 715 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 SLC25A41Q8N5S1 370 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 HTR3CQ8WXA8 447 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 RBM41Q96IZ5 413 aaKnown RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 C9orf72Q96LT7 481 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 CTRCQ99895 268 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 ZCCHC2Q9C0B9 1178 aaKnown RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 GPN2Q9H9Y4 310 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 SLC40A1Q9NP59 571 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 IL26Q9NPH9 171 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 SCHIP1Q9P0W5 487 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-206ENST00000509468 DNAJC16Q9Y2G8 782 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 PKP3Q9Y446 797 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
KDM3B-206ENST00000509468 MN1Q10571 1320 aaPredicted RBP12.42□□□□□ -0.42
KDM3B-206ENST00000509468 PRR19A6NJB7 356 aa12.42□□□□□ -0.42
KDM3B-206ENST00000509468 MTX2O75431 263 aa12.42□□□□□ -0.42
KDM3B-206ENST00000509468 POP7O75817 140 aaKnown RBP12.42□□□□□ -0.42
KDM3B-206ENST00000509468 STK17BO94768 372 aa12.42□□□□□ -0.42
KDM3B-206ENST00000509468 TYRP1P17643 537 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms