RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 BRAFP15056 766 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 CFHR1Q03591 330 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 SEPT6Q14141 434 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-220ENST00000508902 ZDHHC20Q5W0Z9 365 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 LRRTM4Q86VH4 590 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 ZNF761Q86XN6 746 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-220ENST00000508902 CCNJLQ8IV13 435 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 BEND7Q8N7W2 519 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-220ENST00000508902 CCDC89Q8N998 374 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 Q8N9G6 341 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-220ENST00000508902 ASB8Q9H765 288 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 KLC4Q9NSK0 619 aa17.91■□□□□ 0.46
CLDND1-220ENST00000508902 NLE1Q9NVX2 485 aaPredicted RBP17.91■□□□□ 0.46
CLDND1-220ENST00000508902 PRAMEF33A0A0G2JMD5 474 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ERI2A8K979 691 aaKnown RBP17.9■□□□□ 0.46
CLDND1-220ENST00000508902 D6RAR5 112 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 PGRMC1O00264 195 aaKnown RBP17.9■□□□□ 0.46
CLDND1-220ENST00000508902 PSMD3O43242 534 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 NUDT21O43809 227 aaKnown RBP17.9■□□□□ 0.46
CLDND1-220ENST00000508902 KIF5CO60282 957 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 CRTAMO95727 393 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 APRTP07741 180 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
CLDND1-220ENST00000508902 MC4RP32245 332 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 CSF2RBP32927 897 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 CLCNKAP51800 687 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 OR1D5P58170 312 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ISXQ2M1V0 245 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ANKRD22Q5VYY1 191 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ACTRT1Q8TDG2 376 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 MAIP1Q8WWC4 291 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 CDKN2AIPNLQ96HQ2 116 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 C19orf43Q9BQ61 176 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 TIMM29Q9BSF4 260 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 LRRN3Q9H3W5 708 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 EIF2B3Q9NR50 452 aaKnown RBP17.9■□□□□ 0.46
CLDND1-220ENST00000508902 EVA1BQ9NVM1 165 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 DNAJC16Q9Y2G8 782 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 ZFYVE26Q68DK2 2539 aa17.9■□□□□ 0.46
CLDND1-220ENST00000508902 IGLV3-16A0A075B6K0 115 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 OR2AG2A6NM03 316 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 GPR89AB7ZAQ6 455 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 TMEM63AO94886 807 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 GPR89BP0CG08 455 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 PNLIPP16233 465 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 FOXN2P32314 431 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 COILP38432 576 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 FASLGP48023 281 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 VPS41P49754 854 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 UBE2IP63279 158 aaKnown RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 CRADDP78560 199 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 CYP4F3Q08477 520 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 CDH17Q12864 832 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 ITGA9Q13797 1035 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 ZNF658BQ4V348 819 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 LDLRAP1Q5SW96 308 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 IYDQ6PHW0 289 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 DET1Q7L5Y6 550 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 NXPE1Q8N323 547 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 GDAP1Q8TB36 358 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 ZCCHC14Q8WYQ9 949 aaKnown RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 MAGOHBQ96A72 148 aaKnown RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 ATXN7L3BQ96GX2 97 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 PRR11Q96HE9 360 aaPredicted RBP17.89■□□□□ 0.45
CLDND1-220ENST00000508902 FOXP3Q9BZS1 431 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 SYNDIG1Q9H7V2 258 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 ZMIZ1Q9ULJ6 1067 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 WDR37Q9Y2I8 494 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 CHD6Q8TD26 2715 aa17.89■□□□□ 0.45
CLDND1-220ENST00000508902 CCDC162PA2VCL2 907 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 KMOO15229 486 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 SNX2O60749 519 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 TERF1P54274 439 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 ACVR1Q04771 509 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 KCNJ11Q14654 390 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 RTP5Q14D33 572 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 ST3GAL2Q16842 350 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 INSCQ1MX18 579 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 PAPD7Q5XG87 772 aaKnown RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 TMEM220Q6QAJ8 160 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 RBM44Q6ZP01 1051 aaKnown RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 SNX20Q7Z614 316 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 LINC00523Q86TU6 105 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 TRAPPC5Q8IUR0 188 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 LILRA3Q8N6C8 439 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 STYXQ8WUJ0 223 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 SGF29Q96ES7 293 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 DEPDC7Q96QD5 511 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 RANBP9Q96S59 729 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 NUDT22Q9BRQ3 303 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 ABCG4Q9H172 646 aa17.88■□□□□ 0.45
CLDND1-220ENST00000508902 ZNF624Q9P2J8 865 aaPredicted RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 URB1O60287 2271 aaKnown RBP17.88■□□□□ 0.45
CLDND1-220ENST00000508902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.87■□□□□ 0.45
CLDND1-220ENST00000508902 CES2O00748 559 aa17.87■□□□□ 0.45
CLDND1-220ENST00000508902 TLX3O43711 291 aaPredicted RBP17.87■□□□□ 0.45
CLDND1-220ENST00000508902 PHF2O75151 1096 aa17.87■□□□□ 0.45
CLDND1-220ENST00000508902 TCEA3O75764 348 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms