RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 EFNA5P52803 228 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 KRTAP10-9P60411 292 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SPIBQ01892 262 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 NHLH1Q02575 133 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SRSF4Q08170 494 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 GRSF1Q12849 480 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 HNRNPDQ14103 355 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ZMYND11Q15326 602 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 GSTA3Q16772 222 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PTCHD3Q3KNS1 767 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 DAB2IPQ5VWQ8 1189 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM91A1Q658Y4 838 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ANKRD40Q6AI12 368 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 FCRLBQ6BAA4 426 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 GLDNQ6ZMI3 551 aaPredicted RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 CFAP77Q6ZQR2 320 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 RRM2BQ7LG56 351 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 HAUS6Q7Z4H7 955 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PDSS2Q86YH6 399 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 DENND6AQ8IWF6 608 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM9CQ8IZT9 166 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 TRIML2Q8N7C3 387 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ENDOVQ8N8Q3 282 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 L3MBTL4Q8NA19 623 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 Q8NA96 180 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 EXOC6Q8TAG9 804 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ACTRT2Q8TDY3 377 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PSPC1Q8WXF1 523 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 AZIN2Q96A70 460 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 C19orf60Q96EN9 201 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 REXO5Q96IC2 774 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 VCPIP1Q96JH7 1222 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ATP6V1G3Q96LB4 118 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF560Q96MR9 790 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 NECTIN4Q96NY8 510 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PSKH2Q96QS6 385 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 NUDCD1Q96RS6 583 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SECISBP2Q96T21 854 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ZBTB18Q99592 522 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF577Q9BSK1 485 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 IQCGQ9H095 443 aaKnown RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PLK3Q9H4B4 646 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 EPHX3Q9H6B9 360 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ECT2Q9H8V3 914 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SETD4Q9NVD3 440 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PRMT7Q9NVM4 692 aaPredicted RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 THAP1Q9NVV9 213 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 RAB20Q9NX57 234 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC23A1Q9UHI7 598 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 ATP6V1HQ9UI12 483 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 RAB21Q9UL25 225 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 RAD54BQ9Y620 910 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 U3KQV3 271 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 SPACA6W5XKT8 324 aa4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
SMARCA5-202ENST00000508573 PNPLA7Q6ZV29 1317 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 KIF16BQ96L93 1317 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 A0A1B0GTW7 788 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 C2orf92A0A1B0GVN3 265 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 A0A1W2PR77 199 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 TCRBV7S2A1N4TA0A589 114 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CFAP73A6NFT4 308 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ACOD1A6NK06 481 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CXorf49A8MYA2 514 aaPredicted RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 EIF3CLB5ME19 914 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 F8VZ95 297 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 M0QZQ0 153 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 AGPSO00116 658 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 NDUFS8O00217 210 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 MGST3O14880 152 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HS6ST1O60243 411 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC16A8O95907 504 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 BCL10O95999 233 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 S100A6P06703 90 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 OR52Z1P0C646 297 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 C8orf89P0DMQ9 161 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HSPA8P11142 646 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HGFP14210 728 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ARSAP15289 507 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 AREGP15514 252 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 YY1P25490 414 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CHMLP26374 656 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CRHR1P34998 444 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 THBS4P35443 961 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 VIPR2P41587 438 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FRKP42685 505 aaPredicted RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CACNA2D1P54289 1103 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 NAGLUP54802 743 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 EIF3EP60228 445 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 MZT1Q08AG7 82 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 BNIP1Q12981 228 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SPP2Q13103 211 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SNTB2Q13425 540 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 OLIG2Q13516 323 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ARHGAP19Q14CB8 494 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 P3H1Q32P28 736 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 PCGF3Q3KNV8 242 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms