RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF711Q9Y462 761 aa14.36□□□□□ -0.11
DDX41-208ENST00000507955 PRSS21Q9Y6M0 314 aa14.36□□□□□ -0.11
DDX41-208ENST00000507955 SZT2Q5T011 3432 aa14.36□□□□□ -0.11
DDX41-208ENST00000507955 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
DDX41-208ENST00000507955 KIAA0100Q14667 2235 aaKnown RBP14.36□□□□□ -0.11
DDX41-208ENST00000507955 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 TRIM38O00635 465 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 GUCA1CO95843 209 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 CCL5P13501 91 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
DDX41-208ENST00000507955 CREB5Q02930 508 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 DYNC1I2Q13409 638 aaKnown RBP14.35□□□□□ -0.11
DDX41-208ENST00000507955 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
DDX41-208ENST00000507955 ANKS6Q68DC2 871 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 ZFP1Q6P2D0 407 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 ZSWIM9Q86XI8 627 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 HERC6Q8IVU3 1022 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 CDYL2Q8N8U2 506 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 TOP1MTQ969P6 601 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 GRIP2Q9C0E4 1043 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 EPB41L1Q9H4G0 881 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 POPDC3Q9HBV1 291 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 EGFL7Q9UHF1 273 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 RIMKLBQ9ULI2 386 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 REV3LO60673 3130 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 KATNA1O75449 491 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 OR4F21O95013 312 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 CLPTM1O96005 669 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 GNRH1P01148 92 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 FGF4P08620 206 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 CD70P32970 193 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 TTPAP49638 278 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 IL2P60568 153 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 STX1BP61266 288 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 NRF1Q16656 503 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 TSPAN33Q86UF1 283 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 PIH1D2Q8WWB5 315 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 RBM38Q9H0Z9 239 aaKnown RBP14.35□□□□□ -0.11
DDX41-208ENST00000507955 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 SLAMF8Q9P0V8 285 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 PKP3Q9Y446 797 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 GBF1Q92538 1859 aa14.35□□□□□ -0.11
DDX41-208ENST00000507955 C1orf232A0A0U1RR37 186 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TRIM24O15164 1050 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 FZD6O60353 706 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 PRAMEF1O95521 474 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 URODP06132 367 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CSF2RAP15509 400 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CASP2P42575 452 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 EPHB3P54753 998 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 MTA1Q13330 715 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TGFBIQ15582 683 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 MYLK3Q32MK0 819 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 C6orf10Q5SRN2 563 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TPGS2Q68CL5 300 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 GPSM1Q86YR5 675 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 PIP4K2CQ8TBX8 421 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 LRTOMTQ8WZ04 291 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 MPP4Q96JB8 637 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 PRPF18Q99633 342 aaKnown RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 SLC25A23Q9BV35 468 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CIPCQ9C0C6 399 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 SPAG4Q9NPE6 437 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CROTQ9UKG9 612 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 CHD9Q3L8U1 2897 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 A0A1W2PRU2 124 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 C7orf72A4D263 438 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 KLHL33A6NCF5 533 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 GAPDHSO14556 408 aaPredicted RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 PYGLP06737 847 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 RPS17P08708 135 aaKnown RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 ZNF26P17031 533 aaPredicted RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 GDF5P43026 501 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 RPL5P46777 297 aaKnown RBP14.34□□□□□ -0.11
DDX41-208ENST00000507955 CLCN7P51798 805 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 RAB33AQ14088 237 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 RFLNAQ6ZTI6 216 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 STON2Q8WXE9 905 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 SLCO4A1Q96BD0 722 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TCF12Q99081 682 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 SLC2A11Q9BYW1 496 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 SLC30A1Q9Y6M5 507 aa14.34□□□□□ -0.11
DDX41-208ENST00000507955 SNX2O60749 519 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 BAIAP3O94812 1187 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 TRIM16O95361 564 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 PIK3CGP48736 1102 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 RPS6KA2Q15349 733 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 DGKKQ5KSL6 1271 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 ARMC12Q5T9G4 340 aa14.33□□□□□ -0.11
DDX41-208ENST00000507955 ANKRD33Q7Z3H0 272 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms