RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 KHDC1Q4VXA5 237 aaKnown RBP20.52■□□□□ 0.88
CLDND1-216ENST00000507944 CCDC50Q8IVM0 306 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 ZNF567Q8N184 647 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 SLC25A41Q8N5S1 370 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 IL22RA1Q8N6P7 574 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 HAUS1Q96CS2 278 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 VPS35Q96QK1 796 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 FCRL5Q96RD9 977 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 VAT1Q99536 393 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 TIMM29Q9BSF4 260 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 KLHL3Q9UH77 587 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 TFR2Q9UP52 801 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 DNAJC16Q9Y2G8 782 aa20.52■□□□□ 0.88
CLDND1-216ENST00000507944 TLN1Q9Y490 2541 aaKnown RBP20.52■□□□□ 0.87
CLDND1-216ENST00000507944 F5H423 210 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 VIPP01282 170 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 SLC19A1P41440 591 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 MARCKSL1P49006 195 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 CYP4F2P78329 520 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 SPA17Q15506 151 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 SIRPB2Q5JXA9 342 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 TMEM26Q6ZUK4 368 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 PLXDC1Q8IUK5 500 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 ZNF547Q8IVP9 402 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 TRIM48Q8IWZ4 208 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 CCDC170Q8IYT3 715 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 CACNA2D3Q8IZS8 1091 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 TTC30BQ8N4P2 665 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 GDAP1Q8TB36 358 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 HTR3CQ8WXA8 447 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 OXNAD1Q96HP4 312 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 RBM41Q96IZ5 413 aaKnown RBP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 MRGPRX2Q96LB1 330 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 TEFMQ96QE5 360 aaKnown RBP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 UCK1Q9HA47 277 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 IL26Q9NPH9 171 aa20.51■□□□□ 0.87
CLDND1-216ENST00000507944 ZNF624Q9P2J8 865 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLDND1-216ENST00000507944 PRR19A6NJB7 356 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 PDZK1P1A8MUH7 402 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 HACD1B0YJ81 288 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 J3QKU1 62 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 ZIC2O95409 532 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-216ENST00000507944 CHRNA4P43681 627 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 TMEM115Q12893 351 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-216ENST00000507944 SEPT7Q16181 437 aaKnown RBP20.5■□□□□ 0.87
CLDND1-216ENST00000507944 TBR1Q16650 682 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 ZDHHC20Q5W0Z9 365 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 C11orf63Q6NUN7 778 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 ABRAXAS1Q6UWZ7 409 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 RTP4Q96DX8 246 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 QKIQ96PU8 341 aaKnown RBP eCLIP20.5■□□□□ 0.873e-7■■□□□ 11.5
CLDND1-216ENST00000507944 CTRCQ99895 268 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 HEMGNQ9BXL5 484 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 SLC12A9Q9BXP2 914 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 FBXO8Q9NRD0 319 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 HACD3Q9P035 362 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 PILRAQ9UKJ1 303 aa20.5■□□□□ 0.87
CLDND1-216ENST00000507944 RAD1O60671 282 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 IDSP22304 550 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 RPL10P27635 214 aaKnown RBP20.49■□□□□ 0.87
CLDND1-216ENST00000507944 MPP3Q13368 585 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 GTF2H3Q13889 308 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 SLC1A5Q15758 541 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 PPP2R5EQ16537 467 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 CEACAM20Q6UY09 585 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 WASH2PQ6VEQ5 465 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 BBS12Q6ZW61 710 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 IPMKQ8NFU5 416 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 DTX3LQ8TDB6 740 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 BRSK1Q8TDC3 778 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 BLOC1S5Q8TDH9 187 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 KRT35Q92764 455 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 TTC25Q96NG3 672 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 ZPBPQ9BS86 351 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 SPRY4Q9C004 299 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 LUC7LQ9NQ29 371 aaKnown RBP20.49■□□□□ 0.87
CLDND1-216ENST00000507944 WASH6PQ9NQA3 447 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.49■□□□□ 0.87
CLDND1-216ENST00000507944 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 IL17CQ9P0M4 197 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 TRHDEQ9UKU6 1024 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 SLC30A1Q9Y6M5 507 aa20.49■□□□□ 0.87
CLDND1-216ENST00000507944 FLNBO75369 2602 aaKnown RBP20.48■□□□□ 0.87
CLDND1-216ENST00000507944 UGT1A9O60656 530 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 UBXN7O94888 489 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 LIFP15018 202 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 BRAFP15056 766 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 TYRP1P17643 537 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 AMD1P17707 334 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 VCLP18206 1134 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 UGT1A6P19224 532 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 HLA-DPA1P20036 260 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 UGT1A1P22309 533 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 UGT1A4P22310 534 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 CYLC1P35663 651 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-216ENST00000507944 SPAM1P38567 509 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 XRCC4Q13426 336 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 CHRNA6Q15825 494 aa20.48■□□□□ 0.87
CLDND1-216ENST00000507944 AGAP9Q5VTM2 703 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms