RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PTRH2Q9Y3E5 179 aaKnown RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 PCYT1BQ9Y5K3 369 aaPredicted RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 DOCK4Q8N1I0 1966 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 FAM170AA1A519 330 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 TRIM49BA6NDI0 452 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 FAM72CH0Y354 149 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 GADD45BO75293 160 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 ALOX12BO75342 701 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 HEXIM1O94992 359 aaKnown RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 ZWINTO95229 277 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 LCA5LO95447 670 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 LY6G6DO95868 133 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 JCHAINP01591 159 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 ERBB2P04626 1255 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 XRCC1P18887 633 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 TNFAIP3P21580 790 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 DNASE1P24855 282 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 MST1P26927 711 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 VIPR1P32241 457 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 USP8P40818 1118 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 CAPZBP47756 277 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 RGRP47804 291 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SOX8P57073 446 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SNX16P57768 344 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 MCCD1P59942 119 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 AIMP2Q13155 320 aaKnown RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 MYBPHQ13203 477 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 NCF4Q15080 339 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 PTPRRQ15256 657 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SEPT7Q16181 437 aaKnown RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 LONRF1Q17RB8 773 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SLC25A52Q3SY17 297 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 TMTC4Q5T4D3 741 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 FAM72AQ5TYM5 149 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 FAM72DQ6L9T8 149 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 RPUSD3Q6P087 351 aaKnown RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 FAM198BQ6UWH4 519 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SLC26A9Q7LBE3 791 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 FAM72BQ86X60 149 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 ARHGEF19Q8IW93 802 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 WFDC11Q8NEX6 87 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 SCAMP4Q969E2 229 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 AP2M1Q96CW1 435 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 PAGE5Q96GU1 130 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 PCMTD1Q96MG8 357 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 AGAP2Q99490 1192 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 ZNF395Q9H8N7 513 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 KLC4Q9NSK0 619 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 DNAJB12Q9NXW2 375 aaKnown RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 ZNF624Q9P2J8 865 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 TRIM10Q9UDY6 481 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 EPHA6Q9UF33 1036 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 GPN3Q9UHW5 284 aaPredicted RBP7.06□□□□□ -1.28
VCAN-207ENST00000507162 ST6GALNAC2Q9UJ37 374 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 CCDC88CQ9P219 2028 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 DOCK10Q96BY6 2186 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 GTF3C1Q12789 2109 aa7.06□□□□□ -1.28
VCAN-207ENST00000507162 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 PDZK1P1A8MUH7 402 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 J3KR12 359 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 SLC19A2O60779 497 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 CUTAO60888 179 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 DNAJC6O75061 913 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 KLF7O75840 302 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 LRIG2O94898 1065 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 NUDT7P0C024 238 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 CYP2A6P11509 494 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 CYP2A7P20853 494 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 AGXTP21549 392 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 TEAD1P28347 426 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 GNA15P30679 374 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 HADHAP40939 763 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 FOLR3P41439 243 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 SCNN1BP51168 640 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 FOXL2P58012 376 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 ARG2P78540 354 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 HSD11B2P80365 405 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PPP2R2BQ00005 443 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 DMPKQ09013 629 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 GPR18Q14330 331 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PLCL1Q15111 1095 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PCOLCEQ15113 449 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 IGFL2Q6UWQ7 119 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 ADAMTSL4Q6UY14 1074 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PHYKPLQ8IUZ5 450 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 D2HGDHQ8N465 521 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 LINC00301Q8NCQ3 95 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 ACRBPQ8NEB7 543 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 OR8K5Q8NH50 307 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 NT5C3BQ969T7 300 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 CCDC47Q96A33 483 aaKnown RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 SDCCAG3Q96C92 435 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 ZNF501Q96CX3 271 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 CXorf40BQ96DE9 158 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 TBC1D31Q96DN5 1066 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 PGAP3Q96FM1 320 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 CFAP57Q96MR6 1250 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 LRFN5Q96NI6 719 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms