RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CDH22Q9UJ99 828 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 OCM2P0CE71 109 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 OCMP0CE72 109 aaPredicted RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 GALNT2Q10471 571 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 SEL1L3Q68CR1 1132 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 SLC44A3Q8N4M1 653 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TRIML2Q8N7C3 387 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TMEM145Q8NBT3 493 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 MR1Q95460 341 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 FAM162AQ96A26 154 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ZSWIM3Q96MP5 696 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ZIM3Q96PE6 472 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 DNAJC11Q9NVH1 559 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ALKBH4Q9NXW9 302 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 SERTAD3Q9UJW9 196 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TCRBV7S2A1N4TA0A589 114 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 RIPK2O43353 540 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TRIM13O60858 407 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 KCTD19Q17RG1 926 aaPredicted RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 DCAF12L1Q5VU92 463 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 RSPO2Q6UXX9 243 aaPredicted RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 LRRC37BQ96QE4 947 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 AARSD1Q9BTE6 412 aaKnown RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 ARMC7Q9H6L4 198 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 NDE1Q9NXR1 346 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 FAM86C2PA6NEL3 165 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 CHUKO15111 745 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ESR1P03372 595 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 PPP2R1BP30154 601 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 TAS2R50P59544 299 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 Q6ZSR6 202 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 MIPOL1Q8TD10 442 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 AZIN2Q96A70 460 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ZDHHC12Q96GR4 267 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 GID8Q9NWU2 228 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 CDC14AQ9UNH5 594 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 OR1A2Q9Y585 309 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 FAM237BA0A1B0GVD1 139 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 OR51F1A6NGY5 319 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 PIM1P11309 404 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 SUOXP51687 545 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 MPP1Q00013 466 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 CYP51A1Q16850 503 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 FUT11Q495W5 492 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 TCAIMQ8N3R3 496 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 NKD2Q969F2 451 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 RBBP8Q99708 897 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 GDF15Q99988 308 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 ECSITQ9BQ95 431 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 IL21RQ9HBE5 538 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 FAF1Q9UNN5 650 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 ZNF780BQ9Y6R6 833 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 PIAS1O75925 651 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 CD38P28907 300 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 GUCA1AP43080 201 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 ZBTB17Q13105 803 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 FAM182AQ5T1J6 154 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 LCA5Q86VQ0 697 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 LENG8Q96PV6 779 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 GFM1Q96RP9 751 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 PCBD2Q9H0N5 130 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 NEUROG2Q9H2A3 272 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 CAB39LQ9H9S4 337 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 GYG2O15488 501 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 ULK1O75385 1050 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 EEF1DP29692 281 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 SLC6A4P31645 630 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 SLC25A11Q02978 314 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 ZNF33AQ06730 810 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 DEFB133Q30KQ1 61 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 MIER2Q8N344 545 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 FBXO15Q8NCQ5 510 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 TFGQ92734 400 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 TCF12Q99081 682 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 REXO2Q9Y3B8 237 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 A0A0J9YVX5 310 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 TRAFD1O14545 582 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 IL12RB1P42701 662 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 CSNK1EP49674 416 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 AGBL2Q5U5Z8 902 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 ALKBH2Q6NS38 261 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 ZFP28Q8NHY6 868 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 ZNF689Q96CS4 500 aaPredicted RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 NDEL1Q9GZM8 345 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
NEK1-203ENST00000507142 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 SOX13Q9UN79 622 aa9.34□□□□□ -0.91
NEK1-203ENST00000507142 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms