RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ANXA9O76027 345 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 APOC2P02655 101 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 MAP4P27816 1152 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 SPAM1P38567 509 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 HALP42357 657 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 WASHC5Q12768 1159 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 NFATC2Q13469 925 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 CCDC181Q5TID7 509 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 TMEM26Q6ZUK4 368 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 BBS12Q6ZW61 710 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 TXLNBQ8N3L3 684 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 TC2NQ8N9U0 490 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 NKD1Q969G9 470 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 KIAA1143Q96AT1 154 aaPredicted RBP14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 HAUS1Q96CS2 278 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 CATSPER2Q96P56 530 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 QKIQ96PU8 341 aaKnown RBP eCLIP14.22□□□□□ -0.131e-11■■■□□ 14.7
HMGCS1-203ENST00000507004 C19orf43Q9BQ61 176 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 FSD1LQ9BXM9 530 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 EML2O95834 649 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 SLC4A1P02730 911 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PIRTP0C851 137 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PYGMP11217 842 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PLA2G2AP14555 144 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 NFKB1P19838 968 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 CD68P34810 354 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 UGT1A3P35503 534 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 GEMP55040 296 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PDE1BQ01064 536 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 TMEM115Q12893 351 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 MAP7Q14244 749 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PRPSAP1Q14558 356 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 KLHL35Q6PF15 583 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 KDELC1Q6UW63 502 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 DAAM2Q86T65 1068 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 ZC3H18Q86VM9 953 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 TMTC1Q8IUR5 882 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 CACNA2D3Q8IZS8 1091 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 BEND7Q8N7W2 519 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 BMPERQ8N8U9 685 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 GDAP1Q8TB36 358 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PANX2Q96RD6 677 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 PRDM8Q9NQV8 689 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 IL17CQ9P0M4 197 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 RSPH14Q9UHP6 348 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 AAR2Q9Y312 384 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 HYOU1Q9Y4L1 999 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 B3GALT1Q9Y5Z6 326 aa14.21□□□□□ -0.13
HMGCS1-203ENST00000507004 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF891A8MT65 544 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 J3QKU1 62 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 POLR1CO15160 346 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 RAD1O60671 282 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 C9P02748 559 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 PECAM1P16284 738 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 AMD1P17707 334 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 PTPN7P35236 360 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 MC1RQ01726 317 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 DMPKQ09013 629 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 LY6DQ14210 128 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC1A5Q15758 541 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 LONRF2Q1L5Z9 754 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 CRTC3Q6UUV7 619 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF761Q86XN6 746 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 TRAPPC5Q8IUR0 188 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 CDKL3Q8IVW4 592 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 NLGN4XQ8N0W4 816 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF567Q8N184 647 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 DDHD1Q8NEL9 900 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 NLGN4YQ8NFZ3 816 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 CXorf40BQ96DE9 158 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 ZDHHC12Q96GR4 267 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 RAB33BQ9H082 229 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 IL26Q9NPH9 171 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 SMOXQ9NWM0 555 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 OCIAD1Q9NX40 245 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 UBP1Q9NZI7 540 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 SAE1Q9UBE0 346 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 SPO11Q9Y5K1 396 aa14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 PCYT1BQ9Y5K3 369 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-203ENST00000507004 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 PRR19A6NJB7 356 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 BTNL10A8MVZ5 291 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 H7C0C1 242 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 AGRPO00253 132 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 STX7O15400 261 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 UBXN7O94888 489 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 MPSTP25325 297 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 CTNNA2P26232 953 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 CTNNA1P35221 906 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC19A1P41440 591 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 MAPK9P45984 424 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 ATP5OP48047 213 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms