RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CCDC74BQ96LY2 380 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 TIMM29Q9BSF4 260 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 CPNE5Q9HCH3 593 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 BPIFA1Q9NP55 256 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 PRDM8Q9NQV8 689 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 KLC4Q9NSK0 619 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 KCNK4Q9NYG8 393 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 TRIM10Q9UDY6 481 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 RSPH14Q9UHP6 348 aa8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF106Q9H2Y7 1883 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-209ENST00000506632 MGAQ8IWI9 3026 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 PRAMEF33A0A0G2JMD5 474 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 LILRA5A6NI73 299 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 MIF4GDA9UHW6 222 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 TK2O00142 265 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 EFSO43281 561 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 MAP3K7O43318 606 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DUX1O43812 170 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 PRAMEF10O60809 474 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 PPFIA2O75334 1257 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 ANXA9O76027 345 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CDK14O94921 469 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 TJP3O95049 919 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 AGTP01019 485 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CCL4P13236 92 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 BRAFP15056 766 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF7P17097 686 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 XRCC1P18887 633 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 PSMB4P28070 264 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CA5AP35218 305 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SPAM1P38567 509 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 ARSDP51689 593 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 EPHA4P54764 986 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 NAP1L1P55209 391 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 TMEM115Q12893 351 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 KLF1Q13351 362 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CHRNA6Q15825 494 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DENND5AQ6IQ26 1287 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 WDR74Q6RFH5 385 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CRTC3Q6UUV7 619 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 WASH2PQ6VEQ5 465 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 GLT6D1Q7Z4J2 308 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 ARHGAP22Q7Z5H3 698 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 KIAA1328Q86T90 577 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF761Q86XN6 746 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DTX1Q86Y01 620 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 JAMLQ86YT9 394 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 AVL9Q8NBF6 648 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 RCBTB1Q8NDN9 531 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DDHD1Q8NEL9 900 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 OR10G6Q8NH81 332 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 BLOC1S5Q8TDH9 187 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 USP7Q93009 1102 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SH3KBP1Q96B97 665 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SPATA13Q96N96 652 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC38A3Q99624 504 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 FAM118BQ9BPY3 351 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 DESI2Q9BSY9 194 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 FICDQ9BVA6 458 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 FSD1LQ9BXM9 530 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 UCK1Q9HA47 277 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 WASH6PQ9NQA3 447 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SMOXQ9NWM0 555 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 FOXJ2Q9P0K8 574 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SCHIP1Q9P0W5 487 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CPNE7Q9UBL6 633 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 AMFRQ9UKV5 643 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 PCDHGA3Q9Y5H0 932 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
PDLIM5-209ENST00000506632 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 GLYATL1P3A0A0U1RQE8 302 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 MACROD2A1Z1Q3 448 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 C5orf60A6NFR6 353 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AGAP14A8MT82 685 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 B4E171 279 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ERVH48-1M5A8F1 160 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 KCNN4O15554 427 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 GPR39O43194 453 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 BUD23O43709 281 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A9O60656 530 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 SNX2O60749 519 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF189O75820 626 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 FTCDO95954 541 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 LIPCP11150 499 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 FGF3P11487 239 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A6P19224 532 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A1P22309 533 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A4P22310 534 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CD82P27701 267 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A3P35503 534 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CETN2P41208 172 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC19A1P41440 591 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TSPAN7P41732 249 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TNNT3P45378 269 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 MAPK10P53779 464 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 RHDQ02161 417 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms