RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ZNF785A8K8V0 405 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 GCOM1H8Y6P7 765 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CACNB4O00305 520 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 DEXIO95424 95 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CCNE2O96020 404 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 IFNA14P01570 189 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZDHHC11BP0C7U3 371 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 FAM87AP0C7U9 286 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 FAM228BP0C875 321 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 MYZAPP0CAP1 466 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 MYCLP12524 364 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ENO3P13929 434 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PTPN4P29074 926 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 EPHB2P29323 1055 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 NR1H2P55055 460 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RAB1AP62820 205 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CDR2Q01850 454 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF91Q05481 1191 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TNK1Q13470 666 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TARBP2Q15633 366 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PPP6R3Q5H9R7 873 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF484Q5JVG2 852 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TTC39AQ5SRH9 613 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TCERG1LQ5VWI1 586 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RETSATQ6NUM9 610 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ANGPTL8Q6UXH0 198 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 C1orf229Q6ZS94 237 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SLC24A5Q71RS6 500 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TRIM46Q7Z4K8 759 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 LHFPL3Q86UP9 236 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SYNPOQ8N3V7 929 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RASGEF1CQ8N431 466 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 LPCAT1Q8NF37 534 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CDC26Q8NHZ8 85 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CASKIN2Q8WXE0 1202 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PHKBQ93100 1093 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 KISS1RQ969F8 398 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 MTBPQ96DY7 904 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PRMT6Q96LA8 375 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PTPN18Q99952 460 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SLA2Q9H6Q3 261 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ELAC1Q9H777 363 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ATP13A3Q9H7F0 1226 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF556Q9HAH1 456 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZDHHC4Q9NPG8 344 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CHST7Q9NS84 486 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 BTNL2Q9UIR0 455 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CDYLQ9Y232 598 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CAB39Q9Y376 341 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ABCB11O95342 1321 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CEP350Q5VT06 3117 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 A0A0G2JS52 829 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 GRID2IPA4D2P6 1211 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 F8W810 466 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 HAS3O00219 553 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 EEF2KO00418 725 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 DYRK3O43781 588 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SEMA3DO95025 777 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CBX6O95503 412 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 IL6P05231 212 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RNH1P13489 461 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 KRT13P13646 458 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 APOBEC3AP31941 199 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RPL34P49207 117 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ARHGDIAP52565 204 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SPCS3P61009 180 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ACTR1AP61163 376 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 HNRNPKP61978 463 aaKnown RBP eCLIP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ILKQ13418 452 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 DPYSL2Q16555 572 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SMTNL2Q2TAL5 461 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 PXDC1Q5TGL8 231 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 OR5M10Q6IEU7 315 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RFWD3Q6PCD5 774 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ALKAL1Q6UXT8 129 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RBM44Q6ZP01 1051 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 CHST15Q7LFX5 561 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC6Q86X45 466 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 AOPEPQ8N6M6 819 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 AGBL5Q8NDL9 886 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SNIP1Q8TAD8 396 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 FAM172AQ8WUF8 416 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 SLC5A11Q8WWX8 675 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 KCTD13Q8WZ19 329 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ACDQ96AP0 544 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 STMN4Q9H169 189 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 NKX2-4Q9H2Z4 354 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 RPF2Q9H7B2 306 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 OLA1Q9NTK5 396 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 HACD3Q9P035 362 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM9Q9P0T7 183 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 APOBEC3BQ9UH17 382 aaKnown RBP2.26□□□□□ -2.05
NEDD4-205ENST00000506154 ZHX2Q9Y6X8 837 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 NFASCO94856 1347 aa2.26□□□□□ -2.05
NEDD4-205ENST00000506154 IGSF9BQ9UPX0 1349 aa2.25□□□□□ -2.05
NEDD4-205ENST00000506154 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.25□□□□□ -2.05
NEDD4-205ENST00000506154 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.25□□□□□ -2.05
NEDD4-205ENST00000506154 OR6C74A6NCV1 312 aa2.25□□□□□ -2.05
NEDD4-205ENST00000506154 GLTPD2A6NH11 291 aa2.25□□□□□ -2.05
NEDD4-205ENST00000506154 PRSS44E7EML9 344 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms