RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 VCX3BQ9H321 246 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZDHHC3Q9NYG2 299 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CD274Q9NZQ7 290 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CCL26Q9Y258 94 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 DNAJC15Q9Y5T4 150 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 PRAMEF12O95522 483 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 TYRP14679 529 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 GTF2A1P52655 376 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 TGFBIQ15582 683 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CRTC1Q6UUV9 634 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 LRRC74BQ6ZQY2 392 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 PDPRQ8NCN5 879 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 TRPC4APQ8TEL6 797 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 TCEAL4Q96EI5 215 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 FAM126AQ9BYI3 521 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 SPATS2LQ9NUQ6 558 aaKnown RBP17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 MCM8Q9UJA3 840 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 POMPQ9Y244 141 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 SIX3O95343 332 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SRPRAP08240 638 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SNRPB2P08579 225 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 ENO3P13929 434 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 LBPP18428 481 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 POLR2EP19388 210 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDH13P55290 713 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 RAVER1Q8IY67 606 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 RCN3Q96D15 328 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SLC30A3Q99726 388 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 CIPCQ9C0C6 399 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SMG9Q9H0W8 520 aaKnown RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 WDR41Q9HAD4 459 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 RDH14Q9HBH5 336 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 TNFRSF12AQ9NP84 129 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 RIC8BQ9NVN3 520 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 PKD2L2Q9NZM6 624 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 NFKBIL1Q9UBC1 381 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SARDHQ9UL12 918 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 MTF2Q9Y483 593 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 OARD1Q9Y530 152 aa17.08■□□□□ 0.33
TRAPPC11-204ENST00000505676 SCN8AQ9UQD0 1980 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 TSPAN11A1L157 253 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 TBX10O75333 385 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 PAPLNO95428 1278 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 IDO1P14902 403 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 ACADSP16219 412 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 DCDC1P59894 354 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 ACCSLQ4AC99 568 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 COQ5Q5HYK3 327 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 CLEC6AQ6EIG7 209 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 GDPD4Q6W3E5 623 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 CELF5Q8N6W0 485 aaKnown RBP17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 DLG3Q92796 817 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 FAM136AQ96C01 138 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 RPL10LQ96L21 214 aaKnown RBP17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 HGH1Q9BTY7 390 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 S100A14Q9HCY8 104 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 FNDC3AQ9Y2H6 1198 aaKnown RBP17.08■□□□□ 0.32
TRAPPC11-204ENST00000505676 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 NVLO15381 856 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 RFPL2O75678 378 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 MATN4O95460 622 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 ANPEPP15144 967 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 CTSOP43234 321 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 STK19P49842 368 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 CHRNA6Q15825 494 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 ZFP1Q6P2D0 407 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 RNF165Q6ZSG1 346 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 PCYOX1LQ8NBM8 494 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 ROPN1LQ96C74 230 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 HEPHQ9BQS7 1158 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 SARS2Q9NP81 518 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 SMOXQ9NWM0 555 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 GALPQ9UBC7 116 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 FBXO10Q9UK96 956 aa17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 G3BP2Q9UN86 482 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-204ENST00000505676 IGLV3-16A0A075B6K0 115 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 NRG2O14511 850 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 TAF11Q15544 211 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 MUM1Q2TAK8 710 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 MMEL1Q495T6 779 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 SPATS1Q496A3 300 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 PIGGQ5H8A4 983 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 LRRC66Q68CR7 880 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 GPRIN3Q6ZVF9 776 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 ADIPOR2Q86V24 386 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 RIN3Q8TB24 985 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 COPS8Q99627 209 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 ZDHHC6Q9H6R6 413 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 AKTIPQ9H8T0 292 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 IKZF3Q9UKT9 509 aa17.06■□□□□ 0.32
TRAPPC11-204ENST00000505676 ERVW-1Q9UQF0 538 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms