RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ITGA9Q13797 1035 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 PDE1CQ14123 709 aaPredicted RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 MPP2Q14168 576 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 GPR33Q49SQ1 333 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 LYPLAL1Q5VWZ2 237 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TTC19Q6DKK2 380 aaPredicted RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 FAM45BPQ6NSW5 357 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 CERS6Q6ZMG9 384 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 WDR5BQ86VZ2 330 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TMPRSS6Q8IU80 811 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 NRSN1Q8IZ57 195 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 NXPE1Q8N323 547 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TRAM1L1Q8N609 369 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 FAM45AQ8TCE6 357 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TCP10LQ8TDR4 215 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 SCAMP4Q969E2 229 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 AP2M1Q96CW1 435 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 NUS1Q96E22 293 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 DTD2Q96FN9 168 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 CABS1Q96KC9 395 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 COQ10AQ96MF6 247 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 OLFM1Q99784 485 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 PAIP2Q9BPZ3 127 aaKnown RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 RIOK2Q9BVS4 552 aaKnown RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 SLC13A1Q9BZW2 595 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 INTS9Q9NV88 658 aaKnown RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 MKS1Q9NXB0 559 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 FBXL12Q9NXK8 326 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 NFKBIL1Q9UBC1 381 aaPredicted RBP9.27□□□□□ -0.93
TPM3-218ENST00000505010 SERGEFQ9UGK8 458 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TLK1Q9UKI8 766 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 ANKRD6Q9Y2G4 727 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 PCDHGA5Q9Y5G8 931 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 FADS3Q9Y5Q0 445 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.93
TPM3-218ENST00000505010 SETXQ7Z333 2677 aaKnown RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 TRBV5-4A0A0C4DH59 114 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 GIPC1O14908 333 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TM9SF1O15321 606 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TSPAN6O43657 245 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 AP1G1O43747 822 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 OR1I1O60431 355 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 RECQL5O94762 991 aaPredicted RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 RHOBTB1O94844 696 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 C2P06681 752 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ACADMP11310 421 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ZNF7P17097 686 aaPredicted RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 GM2AP17900 193 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 NDUFV2P19404 249 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 FDXRP22570 491 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CRABP2P29373 138 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 AKT1P31749 480 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CA5AP35218 305 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 MDH1P40925 334 aaKnown RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 PTGER3P43115 390 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 PGGT1BP53609 377 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CDKN2DP55273 166 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TAS2R38P59533 333 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 LRRC14Q15048 493 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ZKSCAN8Q15776 578 aaPredicted RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 ATP13A5Q4VNC0 1218 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CTSL3PQ5NE16 218 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 HHATQ5VTY9 493 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ZNF549Q6P9A3 640 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TMEM92Q6UXU6 159 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 SH2D5Q6ZV89 423 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TECPR1Q7Z6L1 1165 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 FAM124AQ86V42 546 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 PIM3Q86V86 326 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TAX1BP1Q86VP1 789 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CEP97Q8IW35 865 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 RBFAQ8N0V3 343 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 GDAP1Q8TB36 358 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 GAB3Q8WWW8 586 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ZCCHC14Q8WYQ9 949 aaKnown RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 FAM136AQ96C01 138 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 SIPA1Q96FS4 1042 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 AARSD1Q9BTE6 412 aaKnown RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 ZSCAN5AQ9BUG6 496 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 SCNM1Q9BWG6 230 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 TMEM121BQ9BXQ6 578 aaPredicted RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 CAPS2Q9BXY5 557 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CLPBQ9H078 707 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 CDH19Q9H159 772 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 ABCG8Q9H221 673 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 C12orf65Q9H3J6 166 aaKnown RBP9.26□□□□□ -0.93
TPM3-218ENST00000505010 SMOC1Q9H4F8 434 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 SLC17A7Q9P2U7 560 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 SCML1Q9UN30 329 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 WASF3Q9UPY6 502 aa9.26□□□□□ -0.93
TPM3-218ENST00000505010 DOCK9Q9BZ29 2069 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 A0A087X1B8 175 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 C4orf47A7E2U8 309 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 E5RI56 91 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 TAF4O00268 1085 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms