RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KYNUQ16719 465 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 RALGPS1Q5JS13 557 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF569Q5MCW4 686 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 HENMT1Q5T8I9 393 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 FAM69BQ5VUD6 431 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CERS6Q6ZMG9 384 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 THSD4Q6ZMP0 1018 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 PRSS42Q7Z5A4 293 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 RBMXL3Q8N7X1 1067 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 FDCSPQ8NFU4 85 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CXorf40BQ96DE9 158 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 C19orf60Q96EN9 201 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 ZDHHC12Q96GR4 267 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 WDR24Q96S15 920 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 NUDT9Q9BW91 350 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 SPATA16Q9BXB7 569 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 TDRD1Q9BXT4 1180 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 POLR1EQ9GZS1 481 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 OR2AG1Q9H205 316 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CARD9Q9H257 536 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 RMI1Q9H9A7 625 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 POT1Q9NUX5 634 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 PARVAQ9NVD7 372 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 DTLQ9NZJ0 730 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 PKD2L2Q9NZM6 624 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 SLC23A2Q9UGH3 650 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 G3BP2Q9UN86 482 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 PPIL1Q9Y3C6 166 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 ADGRG1Q9Y653 693 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 MED13Q9UHV7 2174 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 UNC79Q9P2D8 2635 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 IGHV5-51A0A0C4DH38 117 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ARHGAP10A1A4S6 786 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 GOLGA6L3A6NEY3 463 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 MFSD11O43934 449 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 FZD6O60353 706 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 TMEM63AO94886 807 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 SLC25A14O95258 325 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 RECKO95980 971 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 NELFEP18615 380 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CA4P22748 312 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 IL4RP24394 825 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ELAVL4P26378 380 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 IL1R2P27930 398 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 SERPINB6P35237 376 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 SPINT3P49223 89 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ZNF135P52742 658 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 UBE2HP62256 183 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CDK18Q07002 472 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 GPS2Q13227 327 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ELOAQ14241 798 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 BECN1Q14457 450 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 PLCL1Q15111 1095 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ANKRD20A8PQ5CZ79 823 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 C1QL3Q5VWW1 255 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CYB5D1Q6P9G0 228 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 LRRTM4Q86VH4 590 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 NLRP8Q86W28 1048 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 TICAM1Q8IUC6 712 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 TMEM126BQ8IUX1 230 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 AOPEPQ8N6M6 819 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CCHCR1Q8TD31 782 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 LRRN4Q8WUT4 740 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 KLHL6Q8WZ60 621 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CSPG4P5Q96PW8 444 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 GPR87Q9BY21 358 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 CHST8Q9H2A9 424 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 UCK1Q9HA47 277 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 PCDH9Q9HC56 1237 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 MLXIPLQ9NP71 852 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 FGF21Q9NSA1 209 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 ASF1BQ9NVP2 202 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 GPR83Q9NYM4 423 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 MYO1AQ9UBC5 1043 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 DNPEPQ9ULA0 475 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 SNX7Q9UNH6 387 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 SLC5A6Q9Y289 635 aa6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 RP1L1Q8IWN7 2480 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-203ENST00000504841 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 ANKUB1A6NFN9 424 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 TMEM191CA6NGB0 347 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 CPNE3O75131 537 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 SCRG1O75711 98 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 KRT38O76015 456 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 HLA-DQB2P05538 268 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 KLK3P07288 261 aaPredicted RBP6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 PIRTP0C851 137 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 BRAFP15056 766 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 TCF4P15884 667 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 FERP16591 822 aa6.76□□□□□ -1.33
NPIPB3-203ENST00000504841 ZNF7P17097 686 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms