RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TFR2Q9UP52 801 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 EFR3BQ9Y2G0 817 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 PKP3Q9Y446 797 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 PCDHA3Q9Y5H8 950 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 PCYT1BQ9Y5K3 369 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 CHUKO15111 745 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 KCNJ13O60928 360 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 PPFIA2O75334 1257 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 VIPP01282 170 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 THRAP10827 490 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 VCLP18206 1134 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 IDSP22304 550 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 ZNF75DP51815 510 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 EPHA4P54764 986 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 INSCQ1MX18 579 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 DCAF12Q5T6F0 453 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 CRTC3Q6UUV7 619 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 KDELC1Q6UW63 502 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 BBS12Q6ZW61 710 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 PRICKLE2Q7Z3G6 844 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 LRRTM4Q86VH4 590 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 FAM129CQ86XR2 697 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 IPMKQ8NFU5 416 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 DTX3LQ8TDB6 740 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 HAUS1Q96CS2 278 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 MRGPRX2Q96LB1 330 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 VPS35Q96QK1 796 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 FAM117AQ9C073 453 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 EPB41L1Q9H4G0 881 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 FOXJ2Q9P0K8 574 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 NFKBIL1Q9UBC1 381 aaPredicted RBP11.79□□□□□ -0.52
MED28-203ENST00000503945 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 RSPH14Q9UHP6 348 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 AAR2Q9Y312 384 aaKnown RBP11.79□□□□□ -0.52
MED28-203ENST00000503945 PCDHGA3Q9Y5H0 932 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 SPO11Q9Y5K1 396 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
MED28-203ENST00000503945 CCDC66A2RUB6 948 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 SOWAHDA6NJG2 315 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 EFCAB7A8K855 629 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 PDZK1P1A8MUH7 402 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 B4E171 279 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 APOC4-APOC2K7ER74 178 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 MTX2O75431 263 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ANXA9O76027 345 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
MED28-203ENST00000503945 TJP3O95049 919 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 APOC2P02655 101 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
MED28-203ENST00000503945 AMD1P17707 334 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 HLA-DPA1P20036 260 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 RBL1P28749 1068 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 TSPAN7P41732 249 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 MAPK9P45984 424 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 GEMP55040 296 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 RWDD2BP57060 319 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 NFKB2Q00653 900 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ITPRIPL1Q6GPH6 555 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 XKR5Q6UX68 686 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 DTX1Q86Y01 620 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 TRIM48Q8IWZ4 208 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 BLOC1S5Q8TDH9 187 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 KRT35Q92764 455 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 EXTL1Q92935 676 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ART4Q93070 314 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 ARHGAP9Q9BRR9 750 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 DDA1Q9BW61 102 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 FSD1LQ9BXM9 530 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 TRIM4Q9C037 500 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 RBSNQ9H1K0 784 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 UCK1Q9HA47 277 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 OCIAD1Q9NX40 245 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 TMEM9Q9P0T7 183 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 SLC23A2Q9UGH3 650 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 DNAJC16Q9Y2G8 782 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
MED28-203ENST00000503945 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
MED28-203ENST00000503945 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 A6NCN8 305 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 C2orf81A6NN90 581 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 F5H423 210 aaPredicted RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 STX7O15400 261 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A9O60656 530 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 AGTP01019 485 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ITGB6P18564 788 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A6P19224 532 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A1P22309 533 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A4P22310 534 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms