RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 VEGFDO43915 354 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 MSH3P20585 1137 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 SDHBP21912 280 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ACRV1P26436 265 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ARNTP27540 789 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 GTF2H3Q13889 308 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 SEMA3AQ14563 771 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 DBN1Q16643 649 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 GPR33Q49SQ1 333 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 LDB1Q86U70 411 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 GKN2Q86XP6 184 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 MMGT1Q8N4V1 131 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 BAHD1Q8TBE0 780 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 GPBAR1Q8TDU6 330 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 PEX13Q92968 403 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ZNF669Q96BR6 464 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 ULK4Q96C45 1275 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 SGF29Q96ES7 293 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 RAB17Q9H0T7 212 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 RMI1Q9H9A7 625 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 TRNAU1APQ9NX07 287 aaKnown RBP16.28■□□□□ 0.2
SCLT1-205ENST00000503401 GRHL1Q9NZI5 618 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 SIRPGQ9P1W8 387 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 KCNK6Q9Y257 313 aa16.28■□□□□ 0.2
SCLT1-205ENST00000503401 SPAARA0A1B0GVQ0 90 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 CHUKO15111 745 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 VAPBO95292 243 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 ILF3Q12906 894 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 CALCOCO2Q13137 446 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 HIF1AQ16665 826 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 ANKRD20A4Q4UJ75 823 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 DNTTIP2Q5QJE6 756 aaKnown RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 TMEM220Q6QAJ8 160 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 IGDCC3Q8IVU1 814 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 BEND7Q8N7W2 519 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 CEP112Q8N8E3 955 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 LRRN4CLQ8ND94 238 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 FAM46DQ8NEK8 389 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 STAMBPL1Q96FJ0 436 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 CNDP2Q96KP4 475 aaKnown RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 COPS8Q99627 209 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 ZCCHC2Q9C0B9 1178 aaKnown RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 SLC32A1Q9H598 525 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 WHRNQ9P202 907 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 MARCH4Q9P2E8 410 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 FTSJ1Q9UET6 329 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 SLC23A2Q9UGH3 650 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 RPS6KL1Q9Y6S9 549 aa16.27■□□□□ 0.2
SCLT1-205ENST00000503401 COL5A1P20908 1838 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-205ENST00000503401 ASXL3Q9C0F0 2248 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 FAM237BA0A1B0GVD1 139 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 ALPPL2P10696 532 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 CSRP1P21291 193 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 ACTR1BP42025 376 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 ID4P47928 161 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 ACTR1AP61163 376 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 DNAJC3Q13217 504 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 TRIP6Q15654 476 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 FASTKD1Q53R41 847 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 PDIK1LQ8N165 341 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 BBOF1Q8ND07 529 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 DCUN1D1Q96GG9 259 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 APOLD1Q96LR9 279 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 WDR83Q9BRX9 315 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 GSDMCQ9BYG8 508 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 CATSPERZQ9NTU4 200 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 SPATS2LQ9NUQ6 558 aaKnown RBP16.27■□□□□ 0.19
SCLT1-205ENST00000503401 ZDHHC3Q9NYG2 299 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 TAAR2Q9P1P5 351 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 GPR34Q9UPC5 381 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 DNAJC16Q9Y2G8 782 aa16.27■□□□□ 0.19
SCLT1-205ENST00000503401 RP1P56715 2156 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 ZCWPW2A0A1B0GU75 182 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 MAGEB16A2A368 324 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 B4DGG1 531 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 GPR89AB7ZAQ6 455 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 SMAPO00193 183 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 CD3EAPO15446 510 aaKnown RBP16.26■□□□□ 0.19
SCLT1-205ENST00000503401 OR1I1O60431 355 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 KCNK5O95279 499 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 LDOC1O95751 146 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-205ENST00000503401 GPR89BP0CG08 455 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 PBLDP30039 288 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-205ENST00000503401 ELK3P41970 407 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 ARCN1P48444 511 aaKnown RBP16.26■□□□□ 0.19
SCLT1-205ENST00000503401 PLTPP55058 493 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 ARL4CP56559 192 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 GUCY2DQ02846 1103 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 FASTKD3Q14CZ7 662 aaKnown RBP16.26■□□□□ 0.19
SCLT1-205ENST00000503401 INSCQ1MX18 579 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 C6orf132Q5T0Z8 1188 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 C11orf96Q7Z7L8 435 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 TMEM135Q86UB9 458 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 ANKMY2Q8IV38 441 aa16.26■□□□□ 0.19
SCLT1-205ENST00000503401 UNC5BQ8IZJ1 945 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms