RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MRPL15Q9P015 296 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 UBA2Q9UBT2 640 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 STK39Q9UEW8 545 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEC63Q9UGP8 760 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CHORDC1Q9UHD1 332 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 PTRH2Q9Y3E5 179 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 COL2A1P02458 1487 aaPredicted RBP2.4□□□□□ -2.02
HMGB1P35-201ENST00000503360 TP53BP1Q12888 1972 aaPredicted RBP2.4□□□□□ -2.02
HMGB1P35-201ENST00000503360 A0A1W2PR77 199 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAP2K7O14733 419 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 HS3ST1O14792 307 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 P4HA2O15460 535 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PAPSS1O43252 624 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLPP2O43688 288 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 DDNO94850 711 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 KDM4BO94953 1096 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 CLDN14O95500 239 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MMP9P14780 707 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF12P17014 697 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 APOBEC1P41238 236 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MMP14P50281 582 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PEX5P50542 639 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 HSD17B4P51659 736 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 SUOXP51687 545 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 CLCNKAP51800 687 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PNLIPRP2P54317 469 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAS2R38P59533 333 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRTAP10-3P60369 221 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PPP2R2BQ00005 443 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 ECT2LQ008S8 904 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PDE1BQ01064 536 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 POU3F1Q03052 451 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF155Q12901 538 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MYBPHQ13203 477 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCLAFQ15004 111 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 OASLQ15646 514 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 CALCRLQ16602 461 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 NTRK2Q16620 822 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 DECR1Q16698 335 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRTAP24-1Q3LI83 254 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 SETMARQ53H47 684 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 CCDC92Q53HC0 331 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 BMP2KLQ5H9B9 411 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 C18orf63Q68DL7 685 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 RHBDF2Q6PJF5 856 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 GET4Q7L5D6 327 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 NRROSQ86YC3 692 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 CREBRFQ8IUR6 639 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 EPHX4Q8IUS5 362 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF34Q8IZ26 560 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 RASGEF1CQ8N431 466 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 GSDMBQ8TAX9 411 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAGEC3Q8TD91 643 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 TRPC4APQ8TEL6 797 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 TANKQ92844 425 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAAR8Q969N4 342 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 LRRC59Q96AG4 307 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 SMC6Q96SB8 1091 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 FIZ1Q96SL8 496 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PAFAH2Q99487 392 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MTERF1Q99551 399 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 SEMA3CQ99985 751 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLF1Q9BQI6 1058 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM39BQ9GZU3 492 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 OSGEPL1Q9H4B0 414 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 RETREG1Q9H6L5 497 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 DNAJC18Q9H819 358 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCDH9Q9HC56 1237 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 GIMAP4Q9NUV9 329 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 WSB2Q9NYS7 404 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 C1RLQ9NZP8 487 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 DBNLQ9UJU6 430 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 FBXL2Q9UKC9 423 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PADI1Q9ULC6 663 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 EXO1Q9UQ84 846 aaKnown RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 KLHL20Q9Y2M5 609 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 MAGED1Q9Y5V3 778 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 NFS1Q9Y697 457 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 PASKQ96RG2 1323 aa2.4□□□□□ -2.03
HMGB1P35-201ENST00000503360 IGLV5-37A0A075B6J1 123 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 A0A0B4J293 547 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 SYNDIG1LA6NDD5 238 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 GOLGA6L9A6NEM1 432 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM90A26D6RGX4 464 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 SH2B2O14492 632 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ANKRD28O15084 1053 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADAMDEC1O15204 470 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCNN4O15554 427 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADAM20O43506 726 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 SOCS5O75159 536 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 AVILO75366 819 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 RFPL2O75678 378 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 RSL1D1O76021 490 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 AFPP02771 609 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADRB2P07550 413 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 NR2F1P10589 423 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 FCGR1AP12314 374 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 UGT1A1P22309 533 aa2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 CTNNA1P35221 906 aaKnown RBP2.39□□□□□ -2.03
HMGB1P35-201ENST00000503360 FASLGP48023 281 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms