RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PLPP1O14494 284 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PRRG1O14668 218 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MEFVO15553 781 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 EXTL3O43909 919 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 B4GALT2O60909 372 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PPP6R2O75170 966 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CNMDO75829 334 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 HAUS5O94927 633 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SEC31AO94979 1220 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 DDAH2O95865 285 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SNRPB2P08579 225 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 HAPLN1P10915 354 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 HPDP32754 393 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 PIGAP37287 484 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CCT3P49368 545 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 INPP1P49441 399 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NEK2P51955 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 UBE2E1P51965 193 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RARSP54136 660 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TLE1Q04724 770 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 IFFO1Q0D2I5 559 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ILKQ13418 452 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 BOP1Q14137 746 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 HABP2Q14520 560 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 PAFAH1B3Q15102 231 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 NTRK2Q16620 822 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 INAVAQ3KP66 663 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SAPCD1Q5SSQ6 148 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 HECTD3Q5T447 861 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CCDC181Q5TID7 509 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RPL7L1Q6DKI1 246 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZSCAN25Q6NSZ9 544 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD54Q6NXT1 300 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SYCE2Q6PIF2 218 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 USP43Q70EL4 1123 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CENPUQ71F23 418 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 C14orf80Q86SX3 495 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD13BQ86YJ7 626 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RFX6Q8HWS3 928 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 IRF2BP1Q8IU81 584 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF34Q8IZ26 560 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SPARTQ8N0X7 666 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF567Q8N184 647 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SIX6OS1Q8N1H7 587 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF808Q8N4W9 903 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 CEP112Q8N8E3 955 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC44A5Q8NCS7 719 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RNF214Q8ND24 703 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 OR2L3Q8NG85 312 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MFSD8Q8NHS3 518 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 OSR1Q8TAX0 266 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 FAM81AQ8TBF8 368 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ACTL9Q8TC94 416 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FGF11Q92914 225 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ERP27Q96DN0 273 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 VMP1Q96GC9 406 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 B3GALT6Q96L58 329 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF558Q96NG5 402 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 AGAP3Q96P47 875 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ERMAPQ96PL5 475 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC38A2Q96QD8 506 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DOK1Q99704 481 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CNPY3Q9BT09 278 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SEZ6LQ9BYH1 1024 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 HIPK2Q9H2X6 1198 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ARHGEF3Q9NR81 526 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CHRAC1Q9NRG0 131 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMEM38BQ9NVV0 291 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TECRQ9NZ01 308 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 PLA2G3Q9NZ20 509 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DLGAP2Q9P1A6 1054 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SIRPGQ9P1W8 387 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 STOML2Q9UJZ1 356 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PLAGL2Q9UPG8 496 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 EXO1Q9UQ84 846 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 AFDNP55196 1824 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TRAV19A0A0A6YYK7 116 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 hCG_1642624A0A1W2PR95 340 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TCRBV7S2A1N4TA0A589 114 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TMEM82A0PJX8 343 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 GSAPA4D1B5 854 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 CRYM-AS1A6NIL9 109 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 H3BNC9 293 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PEX12O00623 359 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TXNDC9O14530 226 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RHBDL1O75783 438 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 TSPAN15O95858 294 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 ASLP04424 464 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 HEXAP06865 529 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 DCNP07585 359 aaKnown RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ERCC1P07992 297 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 ITIH1P19827 911 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 SSTR1P30872 391 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 BUD31P41223 144 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 MATKP42679 507 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 REG1BP48304 166 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 PDE6CP51160 858 aa1.42□□□□□ -2.18
XRN1-214ENST00000498077 RBM5P52756 815 aaKnown RBP eCLIP1.42□□□□□ -2.18
XRN1-214ENST00000498077 TPD52P55327 224 aaPredicted RBP1.42□□□□□ -2.18
XRN1-214ENST00000498077 SELENOTP62341 195 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms