RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CRB2Q5IJ48 1285 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 RALGPS1Q5JS13 557 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 ERMARDQ5T6L9 678 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 FAM69BQ5VUD6 431 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 IRGCQ6NXR0 463 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 CYB5D1Q6P9G0 228 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 CERS6Q6ZMG9 384 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 GLIS1Q8NBF1 620 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 BARD1Q99728 777 aaKnown RBP16.19■□□□□ 0.18
VIM-208ENST00000497849 CARD9Q9H257 536 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 OSGEPL1Q9H4B0 414 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 GPR83Q9NYM4 423 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 ATXN10Q9UBB4 475 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 SLC23A2Q9UGH3 650 aa16.19■□□□□ 0.18
VIM-208ENST00000497849 MED13LQ71F56 2210 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 SPTBP11277 2137 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 ANKRD62A6NC57 917 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 MAFKO60675 156 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 CLDN7O95471 211 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 ZNF8P17098 575 aaPredicted RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 SOX5P35711 763 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 CDK18Q07002 472 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 GPS2Q13227 327 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 DPYSQ14117 519 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 PPP6R3Q5H9R7 873 aaPredicted RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 HENMT1Q5T8I9 393 aaKnown RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 CDKAL1Q5VV42 579 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 IZUMO3Q5VZ72 239 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 SP5Q6BEB4 398 aaPredicted RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 CYP4V2Q6ZWL3 525 aaPredicted RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 ZC3H18Q86VM9 953 aaKnown RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 TRIM48Q8IWZ4 208 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 MCEMP1Q8IX19 187 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 SIDT2Q8NBJ9 832 aaKnown RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 SLC38A9Q8NBW4 561 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 RNF214Q8ND24 703 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 MR1Q95460 341 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 ZDHHC12Q96GR4 267 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 BPIFA3Q9BQP9 254 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 RAB33BQ9H082 229 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 SLC40A1Q9NP59 571 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 FAM207AQ9NSI2 230 aaPredicted RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 TAB2Q9NYJ8 693 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 CWC15Q9P013 229 aaKnown RBP16.18■□□□□ 0.18
VIM-208ENST00000497849 PCSK1NQ9UHG2 260 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 MTORP42345 2549 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 CCDC168Q8NDH2 2452 aa16.18■□□□□ 0.18
VIM-208ENST00000497849 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 EBLN1P0CF75 366 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 ATP1A3P13637 1013 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 BRAFP15056 766 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 HNRNPH3P31942 346 aaKnown RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 KLK7P49862 253 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 RAPSNQ13702 412 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 ELOAQ14241 798 aaKnown RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 GPR18Q14330 331 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 GSE1Q14687 1217 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 ZNF648Q5T619 568 aaPredicted RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 LCN10Q6JVE6 187 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 DCUN1D2Q6PH85 259 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 BPHLQ86WA6 291 aaPredicted RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 GAS2L3Q86XJ1 694 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 RAVER1Q8IY67 606 aaKnown RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 NDUFAF2Q8N183 169 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 INPP5DQ92835 1189 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 CHST8Q9H2A9 424 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 ARFGAP3Q9NP61 516 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 WASH6PQ9NQA3 447 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 FGF21Q9NSA1 209 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 POT1Q9NUX5 634 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 G3BP2Q9UN86 482 aaKnown RBP16.17■□□□□ 0.18
VIM-208ENST00000497849 B3GNT3Q9Y2A9 372 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 NTNG1Q9Y2I2 539 aa16.17■□□□□ 0.18
VIM-208ENST00000497849 OR52A4PA6NMU1 304 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 PES1O00541 588 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 EPHB6O15197 1021 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 MMP13P45452 471 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 HCAR3P49019 387 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 POLR2FP61218 127 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 PDE1BQ01064 536 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ACY1Q03154 408 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ZRSR2Q15696 482 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 SEPT7Q16181 437 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 TCP11X2Q5H9J9 407 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 BBS5Q8N3I7 341 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ZBTB2Q8N680 514 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ENDOVQ8N8Q3 282 aaKnown RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 TMEM102Q8N9M5 508 aaPredicted RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 UBXN4Q92575 508 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ZNF514Q96K75 400 aaPredicted RBP16.16■□□□□ 0.18
VIM-208ENST00000497849 OR2AG1Q9H205 316 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 NLRC4Q9NPP4 1024 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ETNK2Q9NVF9 386 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 C5AR2Q9P296 337 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 SNX7Q9UNH6 387 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 TACC2O95359 2948 aa16.16■□□□□ 0.18
VIM-208ENST00000497849 ZGRF1Q86YA3 2104 aa16.15■□□□□ 0.18
VIM-208ENST00000497849 SEC16AO15027 2179 aa16.15■□□□□ 0.18
VIM-208ENST00000497849 SCRG1O75711 98 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms