RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 MPSTP25325 297 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 CSF2RBP32927 897 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 ADRA1AP35348 466 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 ETV5P41161 510 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 LIMK2P53671 638 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 MAPK10P53779 464 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 UCNP55089 124 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 GPLD1P80108 840 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 CFHR1Q03591 330 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 TMEM115Q12893 351 aaPredicted RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 OLIG2Q13516 323 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 PTPRCAPQ14761 206 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 KIR2DS5Q14953 304 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 INSCQ1MX18 579 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 SOWAHCQ53LP3 525 aaPredicted RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 GPR155Q7Z3F1 870 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 ZNF547Q8IVP9 402 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 RNF10Q8N5U6 811 aaKnown RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 OR10G6Q8NH81 332 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 BRSK1Q8TDC3 778 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 SH3KBP1Q96B97 665 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 TTC25Q96NG3 672 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 DPYSL5Q9BPU6 564 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 ZMYND15Q9H091 742 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 CPNE5Q9HCH3 593 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 TMEM9Q9P0T7 183 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
THBS3-208ENST00000496332 CPNE7Q9UBL6 633 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 ARL5AQ9Y689 179 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 CAPN6Q9Y6Q1 641 aa11.67□□□□□ -0.54
THBS3-208ENST00000496332 PRAMEF33A0A0G2JMD5 474 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TCRBV7S2A1N4TA0A589 114 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 C2orf81A6NN90 581 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 GAPDHSO14556 408 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 HGSO14964 777 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 GPR39O43194 453 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 DUX1O43812 170 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 PRAMEF10O60809 474 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 CCL4P13236 92 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 LPOP22079 712 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 CA5AP35218 305 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TMPRSS3P57727 454 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 GSDMDP57764 484 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 CLN3Q13286 438 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 KLF1Q13351 362 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 TRA2AQ13595 282 aaKnown RBP eCLIP11.66□□□□□ -0.54
THBS3-208ENST00000496332 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TAF1AQ15573 450 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 LDLRAP1Q5SW96 308 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TMEM71Q6P5X7 295 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TRAPPC5Q8IUR0 188 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 FAM71DQ8N9W8 422 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 ZNF398Q8TD17 642 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 USP7Q93009 1102 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 BBC3Q96PG8 261 aaPredicted RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 PPP1R2P1Q96PQ5 205 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 TBL1YQ9BQ87 522 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 R3HDM2Q9Y2K5 976 aaKnown RBP11.66□□□□□ -0.54
THBS3-208ENST00000496332 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 KCTD3Q9Y597 815 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 KIF26BQ2KJY2 2108 aa11.66□□□□□ -0.54
THBS3-208ENST00000496332 PRR19A6NJB7 356 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 PDZK1P1A8MUH7 402 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 C9orf172C9J069 976 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 THRAP10827 490 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 VCLP18206 1134 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 IDSP22304 550 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 RPL10P27635 214 aaKnown RBP11.65□□□□□ -0.54
THBS3-208ENST00000496332 MAPK9P45984 424 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 UBE2IP63279 158 aaKnown RBP11.65□□□□□ -0.54
THBS3-208ENST00000496332 MSLNQ13421 630 aaPredicted RBP11.65□□□□□ -0.54
THBS3-208ENST00000496332 ITGA9Q13797 1035 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 PARP6Q2NL67 630 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 GPRC6AQ5T6X5 926 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 ARHGAP40Q5TG30 622 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 DENND5AQ6IQ26 1287 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 ARHGEF18Q6ZSZ5 1173 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 C11orf96Q7Z7L8 435 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 TRIM48Q8IWZ4 208 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 RASGEF1AQ8N9B8 481 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 AVL9Q8NBF6 648 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 DDHD1Q8NEL9 900 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 OR4K2Q8NGD2 314 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 NCSTNQ92542 709 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 LRRC45Q96CN5 670 aa11.65□□□□□ -0.54
THBS3-208ENST00000496332 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms