RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TSPYL4Q9UJ04 414 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 EXO1Q9UQ84 846 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 B3GALT5Q9Y2C3 310 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 WBP11Q9Y2W2 641 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 GPR75-ASB3A0A0A6YYF3 556 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 TMEM8BA6NDV4 472 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 SERINC4A6NH21 518 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 LRRC72A6NJI9 287 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 H7C0S8 307 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 MAP2K7O14733 419 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 RSL1D1O76021 490 aaKnown RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 ZWINTO95229 277 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 CGAP01215 116 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 HIST1H2ABP04908 130 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 CD58P19256 250 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 HIST1H2ADP20671 130 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 RPL3P39023 403 aaKnown RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 PRCPP42785 496 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 HNRNPH2P55795 449 aaKnown RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 Q0VFX4 171 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 OTUD3Q5T2D3 398 aaPredicted RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 TYW3Q6IPR3 259 aaKnown RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 HIST3H2AQ7L7L0 130 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 SYT2Q8N9I0 419 aaPredicted RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 TDRD5Q8NAT2 981 aaKnown RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 APPL2Q8NEU8 664 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 SPATA22Q8NHS9 363 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 TXNDC15Q96J42 360 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 LINC00615Q96LM1 132 aaPredicted RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 DDOQ99489 341 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 BAG1Q99933 345 aaPredicted RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 C1RLQ9NZP8 487 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 WNT16Q9UBV4 365 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 STK39Q9UEW8 545 aa3.68□□□□□ -1.82
CLK1-214ENST00000496205 TTC7AQ9ULT0 858 aaPredicted RBP3.68□□□□□ -1.82
CLK1-214ENST00000496205 hDV102S1A0JD36 115 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 FEZF1A0PJY2 475 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 LINC01553A4QN01 128 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 FAM90A26D6RGX4 464 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 VWA5AO00534 786 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 AVILO75366 819 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 TOMM70O94826 608 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 SLCO2B1O94956 709 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CH25HO95992 272 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 ACTN1P12814 892 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CPT2P23786 658 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 NMBRP28336 390 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 BDKRB2P30411 391 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CLDN20P56880 219 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 TAS2R38P59533 333 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CSNK2A1P68400 391 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 CALD1Q05682 793 aaKnown RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 DDR1Q08345 913 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 DHX34Q14147 1143 aaKnown RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 PPP6R3Q5H9R7 873 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 FSCBQ5H9T9 825 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 DNTTIP2Q5QJE6 756 aaKnown RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 OTUD1Q5VV17 481 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 FAM43BQ6ZT52 329 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 CACNA2D4Q7Z3S7 1137 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 ARID3BQ8IVW6 561 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 HACE1Q8IYU2 909 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 DSELQ8IZU8 1212 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 TTC30BQ8N4P2 665 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 AVL9Q8NBF6 648 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 POGLUT1Q8NBL1 392 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CSNK2A3Q8NEV1 391 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 OR5R1Q8NH85 324 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 SLC44A1Q8WWI5 657 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 LRFN5Q96NI6 719 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CMKLR1Q99788 373 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 HGH1Q9BTY7 390 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 C1QTNF1Q9BXJ1 281 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 FAM129AQ9BZQ8 928 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 GOLPH3LQ9H4A5 285 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 ZNF556Q9HAH1 456 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 ARGLU1Q9NWB6 273 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 TAB2Q9NYJ8 693 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 CFDP1Q9UEE9 299 aaPredicted RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 ANAPC2Q9UJX6 822 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 AGO1Q9UL18 857 aaKnown RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 PCDHGA5Q9Y5G8 931 aa3.67□□□□□ -1.82
CLK1-214ENST00000496205 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.67□□□□□ -1.82
CLK1-214ENST00000496205 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 KANSL1LA0AUZ9 987 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 CLEC18AA5D8T8 446 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 EIF4E1BA6NMX2 242 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 A8MXE2 369 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 SOCS5O75159 536 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 ZNF217O75362 1048 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 GPC4O75487 556 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 WISP2O76076 250 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 BAG2O95816 211 aa3.66□□□□□ -1.82
CLK1-214ENST00000496205 TCEA1P23193 301 aaKnown RBP3.66□□□□□ -1.82
CLK1-214ENST00000496205 DNASE1P24855 282 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms