RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SUFUQ9UMX1 484 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 CRYL1Q9Y2S2 319 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 PLEKHM1Q9Y4G2 1056 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 PCDHGA5Q9Y5G8 931 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 GPR179Q6PRD1 2367 aa13.33□□□□□ -0.28
PTPN7-218ENST00000496197 IQCF5A8MTL0 148 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 PRR5-ARHGAP8B1AHC4 643 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CHUKO15111 745 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 NUAK1O60285 661 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CDK14O94921 469 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 AHSGP02765 367 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 SHBGP04278 402 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CELA2BP08218 269 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-218ENST00000496197 HSD17B3P37058 310 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 PGGT1BP53609 377 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 SRP54P61011 504 aaKnown RBP13.32□□□□□ -0.28
PTPN7-218ENST00000496197 NHLH1Q02575 133 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 OVGP1Q12889 678 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 SLC29A2Q14542 456 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 SHBQ15464 509 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 PLA2G4EQ3MJ16 856 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CTSL3PQ5NE16 218 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 ZNF549Q6P9A3 640 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CRTC3Q6UUV7 619 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CERS6Q6ZMG9 384 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CYS1Q717R9 158 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
PTPN7-218ENST00000496197 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 ACVR1CQ8NER5 493 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 FAM174AQ8TBP5 190 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 UBLCP1Q8WVY7 318 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-218ENST00000496197 BIRC8Q96P09 236 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 CYP4F12Q9HCS2 524 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 PARD6AQ9NPB6 346 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 ZFATQ9P243 1243 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 VPS18Q9P253 973 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 KLQ9UEF7 1012 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 MOSPD1Q9UJG1 213 aa13.32□□□□□ -0.28
PTPN7-218ENST00000496197 UBA6A0AVT1 1052 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 SPAG6O75602 509 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 LMNAP02545 664 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 RETP07949 1114 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 ATP1B2P14415 290 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 MSH3P20585 1137 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 MCM3P25205 808 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 HTR1BP28222 390 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 GCAP28676 217 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 STX2P32856 288 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 GNPDA1P46926 289 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 LEPRP48357 1165 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 TTPAP49638 278 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 C21orf59P57076 290 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 SPEM2Q0P670 501 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 ITIH4Q14624 930 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 SF3A2Q15428 464 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 TEAD4Q15561 434 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 PYCR3Q53H96 274 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 AARS2Q5JTZ9 985 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 RBM20Q5T481 1227 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 RD3Q7Z3Z2 195 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 PARGQ86W56 976 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 HID1Q8IV36 788 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 CCL4L1Q8NHW4 92 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 MRRFQ96E11 262 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 CARS2Q9HA77 564 aaKnown RBP13.31□□□□□ -0.28
PTPN7-218ENST00000496197 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 GULP1Q9UBP9 304 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 SLC23A2Q9UGH3 650 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 MED16Q9Y2X0 877 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 KNL1Q8NG31 2342 aa13.31□□□□□ -0.28
PTPN7-218ENST00000496197 TNFRSF10CO14798 259 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 VEGFDO43915 354 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 NDUFS3O75489 264 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 CSF2P04141 144 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 IVLP07476 585 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 ABHD2P08910 425 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 TGM1P22735 817 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 PMLP29590 882 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 FMO4P31512 558 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 NSG1P42857 185 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 HK3P52790 923 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
PTPN7-218ENST00000496197 IL9RQ01113 521 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 PTK2BQ14289 1009 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 LYPLAL1Q5VWZ2 237 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 TMEM220Q6QAJ8 160 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 NAPRTQ6XQN6 538 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
PTPN7-218ENST00000496197 DCP2Q8IU60 420 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms