RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 SP100P23497 879 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 FCARP24071 287 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 EPHB2P29323 1055 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 HOXC13P31276 330 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 VIPR2P41587 438 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 MTHFRP42898 656 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 SLC11A2P49281 568 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 PER3P56645 1201 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 DYNLT1P63172 113 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 SIX1Q15475 284 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 ZNF77Q15935 545 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 WHAMMP3Q1A5X7 153 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 ALFQ53S48 1182 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 PRAMEF14Q5SWL7 426 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 NCBP2-AS2Q69YL0 99 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 SLC9A4Q6AI14 798 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 RWDD4Q6NW29 188 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 FBXL22Q6P050 247 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 DARS2Q6PI48 645 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 HTR3DQ70Z44 454 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 VSIG1Q86XK7 387 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 BBS7Q8IWZ6 715 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 FAM217AQ8IXS0 508 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 LGI2Q8N0V4 545 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 CELF5Q8N6W0 485 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 PLD5Q8N7P1 536 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 OR14K1Q8NGZ2 314 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 SUSD6Q92537 303 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 IGSF8Q969P0 613 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 AZIN2Q96A70 460 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 HAUS1Q96CS2 278 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 TBC1D31Q96DN5 1066 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 P2RY11Q96G91 374 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 C1orf74Q96LT6 269 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 RIPOR3Q96MK2 946 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 RPRD1AQ96P16 312 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 LRRC3BQ96PB8 259 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 FAM118BQ9BPY3 351 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 AP1M1Q9BXS5 423 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 KCNH6Q9H252 994 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 UBE2ZQ9H832 354 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 ETNK2Q9NVF9 386 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 MPP6Q9NZW5 540 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 FAM30AQ9NZY2 134 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 RCOR3Q9P2K3 495 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 SLC12A6Q9UHW9 1150 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 STOML2Q9UJZ1 356 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 LSM7Q9UK45 103 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 CDH7Q9ULB5 785 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 TTC7AQ9ULT0 858 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 R3HDM2Q9Y2K5 976 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 USP15Q9Y4E8 981 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 DOCK4Q8N1I0 1966 aa5.6□□□□□ -1.51
GAPVD1-218ENST00000495588 CHD9Q3L8U1 2897 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 DRGXA6NNA5 263 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 HEPACAM2A8MVW5 462 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 ZNF487B1APH4 448 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MBTPS2O43462 519 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MFSD11O43934 449 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TSPAN3O60637 253 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 CNTN5O94779 1100 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TJP3O95049 919 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 LATS1O95835 1130 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 LAMP2P13473 410 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TYRP14679 529 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MALP21145 153 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TGM2P21980 687 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MSX2P35548 267 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 CETN2P41208 172 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 PAFAH1B1P43034 410 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 HTR3AP46098 478 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 HCAR3P49019 387 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 ZNF135P52742 658 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 RPS24P62847 133 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 OTUD4Q01804 1114 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 GBE1Q04446 702 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 CKAP4Q07065 602 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 C2orf54Q08AI8 447 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 SLC10A2Q12908 348 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 FOXL1Q12952 345 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MTA1Q13330 715 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 MRPL49Q13405 166 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TUBB2AQ13885 445 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 PAFAH1B3Q15102 231 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 CNN3Q15417 329 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 KCTD19Q17RG1 926 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 C5orf22Q49AR2 442 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 KHDC1Q4VXA5 237 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 C1orf228Q6PIY5 440 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 PARM1Q6UWI2 310 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 LRRC31Q6UY01 552 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 TPGS1Q6ZTW0 290 aa5.59□□□□□ -1.51
GAPVD1-218ENST00000495588 BBS12Q6ZW61 710 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms