RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ATXN3P54252 364 aaPredicted RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 GAD2Q05329 585 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 GFPT1Q06210 699 aaPredicted RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 ZNF33AQ06730 810 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 STIM1Q13586 685 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 BYSLQ13895 437 aaKnown RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 ARHGEF7Q14155 803 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 KNOP1Q1ED39 458 aaKnown RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 DUOXA1Q1HG43 343 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 KIAA0895LQ68EN5 471 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 ANKRD40Q6AI12 368 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 TRAPPC11Q7Z392 1133 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 TMEM25Q86YD3 366 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 CREBRFQ8IUR6 639 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 GUF1Q8N442 669 aaKnown RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 HDDC3Q8N4P3 179 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 MINDY1Q8N5J2 469 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 CEP76Q8TAP6 659 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 SCFD1Q8WVM8 642 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 NELFBQ8WX92 580 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 WBP2Q969T9 261 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 IQCDQ96DY2 449 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 ERLEC1Q96DZ1 483 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 DHTKD1Q96HY7 919 aaPredicted RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 CAMK1GQ96NX5 476 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 SLITRK1Q96PX8 696 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 NAT10Q9H0A0 1025 aaKnown RBP6.66□□□□□ -1.34
VIM-207ENST00000495528 SNX25Q9H3E2 840 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 GLOD4Q9HC38 313 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 OLFML3Q9NRN5 406 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 EHD3Q9NZN3 535 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 FOXJ2Q9P0K8 574 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 TBC1D14Q9P2M4 693 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 LAMA1P25391 3075 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 OBSL1O75147 1896 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
VIM-207ENST00000495528 IGHV1OR15-9A0A0B4J2B8 117 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 A0A1W2PQF6 199 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 TRIM49BA6NDI0 452 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 LINC00473A8K010 186 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 SMTNL1A8MU46 457 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 BECN2A8MW95 431 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 H0Y626 953 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 CLDN5O00501 218 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 PSMA7O14818 248 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 MGST3O14880 152 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 RRP9O43818 475 aaKnown RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 TACC1O75410 805 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 TRIM16O95361 564 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 FESP07332 822 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 ANXA2P07355 339 aaKnown RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 SERPINF2P08697 491 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 FAM163BP0C2L3 166 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 HOXB2P14652 356 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 ZFXP17010 805 aaPredicted RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 TPH1P17752 444 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 YWHAQP27348 245 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 HOXD12P35452 270 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 GRIA3P42263 894 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 DPP6P42658 865 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 PGFP49763 221 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 ALCAMQ13740 583 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 TPD52L1Q16890 204 aaPredicted RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 C10orf76Q5T2E6 689 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 C19orf48Q6RUI8 117 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 OLFML1Q6UWY5 402 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 SLC36A4Q6YBV0 504 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 DTX2Q86UW9 622 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 LUZP1Q86V48 1076 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 WDR49Q8IV35 697 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 BBS7Q8IWZ6 715 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 NUP93Q8N1F7 819 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 SCAMP5Q8TAC9 235 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 IPCEF1Q8WWN9 437 aaPredicted RBP6.65□□□□□ -1.34
VIM-207ENST00000495528 RFKQ969G6 155 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 FBXO32Q969P5 355 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 R3HDM4Q96D70 268 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 EEF2KMTQ96G04 330 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 PBKQ96KB5 322 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 KCNK16Q96T55 309 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 ACOX2Q99424 681 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 AGAP2Q99490 1192 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 TSG101Q99816 390 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 ALG8Q9BVK2 526 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 SPHK2Q9NRA0 654 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 DEC1Q9P2X7 70 aa6.65□□□□□ -1.34
VIM-207ENST00000495528 SPEGQ15772 3267 aa6.65□□□□□ -1.35
VIM-207ENST00000495528 MYO16Q9Y6X6 1858 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 ZZEF1O43149 2961 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 BICDL2A1A5D9 508 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 A1L4Q6 167 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 A8MXQ7 604 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PRRT4C9JH25 899 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 PDXKO00764 312 aa6.64□□□□□ -1.35
VIM-207ENST00000495528 EIF3DO15371 548 aaKnown RBP eCLIP6.64□□□□□ -1.35
VIM-207ENST00000495528 SLC16A3O15427 465 aaKnown RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 HOXC11O43248 304 aaPredicted RBP6.64□□□□□ -1.35
VIM-207ENST00000495528 TGFB1I1O43294 461 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms