RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PKD2L2Q9NZM6 624 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 INSIG1O15503 277 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 RSL1D1O76021 490 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 GBAP04062 536 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 PKMP14618 531 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 HTRA3P83110 453 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 BNIP3Q12983 259 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 CYP27C1Q4G0S4 372 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ANKRD26P1Q6NSI1 321 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 RNF217Q8TC41 542 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ASB9Q96DX5 294 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 IMP4Q96G21 291 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 NAA50Q9GZZ1 169 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ARL15Q9NXU5 204 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 TRPM5Q9NZQ8 1165 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ANAPC2Q9UJX6 822 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ZNF638Q14966 1978 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 MGAMO43451 1857 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 OR4D2P58180 307 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ZNF648Q5T619 568 aaPredicted RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 TCF12Q99081 682 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 ADI1Q9BV57 179 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 TDRD1Q9BXT4 1180 aaKnown RBP13.33□□□□□ -0.28
GPC1-209ENST00000495100 DPY30Q9C005 99 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 PARVBQ9HBI1 364 aa13.33□□□□□ -0.28
GPC1-209ENST00000495100 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 PRAMEF1O95521 474 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 CD1DP15813 335 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 LPOP22079 712 aaPredicted RBP13.32□□□□□ -0.28
GPC1-209ENST00000495100 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
GPC1-209ENST00000495100 CYP4F2P78329 520 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 PFKPQ01813 784 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 RHDQ02161 417 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 CYP4F3Q08477 520 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 MSANTD2Q6P1R3 559 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 RSPO2Q6UXX9 243 aaPredicted RBP13.32□□□□□ -0.28
GPC1-209ENST00000495100 ZNF621Q6ZSS3 439 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 SYVN1Q86TM6 617 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 FAR2Q96K12 515 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 ACAT2Q9BWD1 397 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
GPC1-209ENST00000495100 CLDN7O95471 211 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 ENTPD1P49961 510 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 CYP4F8P98187 520 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 SCAPQ12770 1279 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 FUT10Q6P4F1 479 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 ANKS3Q6ZW76 656 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 FUNDC1Q8IVP5 155 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 OR56A4Q8NGH8 313 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 SNX19Q92543 992 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 ASB3Q9Y575 518 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 WDR81Q562E7 1941 aa13.32□□□□□ -0.28
GPC1-209ENST00000495100 LDB2O43679 373 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 NDST3O95803 873 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 CTGFP29279 349 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SLC6A4P31645 630 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SCNN1AP37088 669 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 ZXDBP98169 803 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 LCP2Q13094 533 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 OGFRL1Q5TC84 451 aaPredicted RBP13.31□□□□□ -0.28
GPC1-209ENST00000495100 SUSD3Q96L08 255 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 ZDHHC6Q9H6R6 413 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
GPC1-209ENST00000495100 RIMS3Q9UJD0 308 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 TLR6Q9Y2C9 796 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 hCG_2039718K7EN88 272 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SERPIND1P05546 499 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
GPC1-209ENST00000495100 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
GPC1-209ENST00000495100 NR1H2P55055 460 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 RGMBQ6NW40 437 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
GPC1-209ENST00000495100 SGCDQ92629 289 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 APOLD1Q96LR9 279 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 RIC8BQ9NVN3 520 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 CMTM6Q9NX76 183 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SLC7A4O43246 635 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 NPHS1O60500 1241 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 GLUD1P00367 558 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 HCAR3P49019 387 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SLC11A1P49279 550 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 ABRQ12979 859 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 PRKG2Q13237 762 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 ITGADQ13349 1161 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 SERINC5Q86VE9 423 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms