RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	LRRC45	Q96CN5	670 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZNF514	Q96K75	400 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	DCBLD2	Q96PD2	775 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	DESI2	Q9BSY9	194 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	FOXP3	Q9BZS1	431 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	STN1	Q9H668	368 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	EPB41L5	Q9HCM4	733 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	TRIM10	Q9UDY6	481 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	PCDHGA3	Q9Y5H0	932 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ATM	Q13315	3056 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	KALRN	O60229	2985 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	IGHV5-10-1	A0A0J9YXX1	117 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891		A0A0U1RQJ8	604 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	TEX51	A0A1B0GUA7	166 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	C2orf81	A6NN90	581 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891		H7C0S8	307 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	FTCD	O95954	541 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	AGT	P01019	485 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	CD82	P27701	267 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	PSMB4	P28070	264 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	ALDH4A1	P30038	563 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	P3H1	Q32P28	736 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	MAP9	Q49MG5	647 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	KHDC1	Q4VXA5	237 aa	Known RBP	10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	TMEM71	Q6P5X7	295 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	OR10G6	Q8NH81	332 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	CCDC110	Q8TBZ0	833 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	BLOC1S5	Q8TDH9	187 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	KCNE4	Q8WWG9	221 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	NUDT22	Q9BRQ3	303 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	FICD	Q9BVA6	458 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	SEMA6C	Q9H3T2	930 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	SYNDIG1	Q9H7V2	258 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	C10orf88	Q9H8K7	445 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	BPIFA1	Q9NP55	256 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	KCNK4	Q9NYG8	393 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC23A2	Q9UGH3	650 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	KCNK6	Q9Y257	313 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	PRKAB1	Q9Y478	270 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	LOXL2	Q9Y4K0	774 aa		10.13	□□□□□ -0.79
NEPRO-222	ENST00000494891	PMS2P1	A4D2B8	440 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ERI2	A8K979	691 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	TK2	O00142	265 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	STX7	O15400	261 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	TOX3	O15405	576 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	PSMD3	O43242	534 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	DUX1	O43812	170 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ABCB7	O75027	752 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	CRTAM	O95727	393 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	JMJD7	P0C870	316 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	HOXB3	P14651	431 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	BRAF	P15056	766 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	VCL	P18206	1134 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC5A2	P31639	672 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	CSF2RB	P32927	897 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	HADHA	P40939	763 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZNF140	P52738	457 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	TMPRSS3	P57727	454 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	XIAP	P98170	497 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	NFATC2	Q13469	925 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	BIRC2	Q13490	618 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	C16orf72	Q14CZ0	275 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	OASL	Q15646	514 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	CHRNA6	Q15825	494 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	MEI1	Q5TIA1	1274 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	BROX	Q5VW32	411 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ARHGAP22	Q7Z5H3	698 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	DTX1	Q86Y01	620 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC25A41	Q8N5S1	370 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZNF398	Q8TD17	642 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	HEXDC	Q8WVB3	486 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	WBP1	Q96G27	269 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	LINC00615	Q96LM1	132 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC38A3	Q99624	504 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	TBL1Y	Q9BQ87	522 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	LRRC40	Q9H9A6	602 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	RDH14	Q9HBH5	336 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	PRDM8	Q9NQV8	689 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	KLC4	Q9NSK0	619 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	POT1	Q9NUX5	634 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	CPNE7	Q9UBL6	633 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZKSCAN5	Q9Y2L8	839 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	ARL5A	Q9Y689	179 aa		10.12	□□□□□ -0.79
NEPRO-222	ENST00000494891	MN1	Q10571	1320 aa	Predicted RBP	10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	IGLV3-16	A0A075B6K0	115 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	TRBV5-4	A0A0C4DH59	114 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891		B4E171	279 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	LDB2	O43679	373 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	SRP72	O76094	671 aa	Known RBP	10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	PRAMEF1	O95521	474 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	AP2A1	O95782	977 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC4A1	P02730	911 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	C9	P02748	559 aa		10.11	□□□□□ -0.79
NEPRO-222	ENST00000494891	CCDC175	P0C221	793 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms