RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SNRNP200O75643 2136 aaKnown RBP11.48□□□□□ -0.57
VTI1A-208ENST00000494728 LOC285095A0A1B0GVY8 99 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 LILRA5A6NI73 299 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 OR52A4PA6NMU1 304 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 TPM1P09493 284 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 ITGB6P18564 788 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 CSTF2P33240 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SLC19A1P41440 591 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 PPM1FP49593 454 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 CTSCP53634 463 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 DRG2P55039 364 aaKnown RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 PPP1CAP62136 330 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 PTPRCAPQ14761 206 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 TBR1Q16650 682 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 INSCQ1MX18 579 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 WDR74Q6RFH5 385 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 XKR5Q6UX68 686 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SLC25A41Q8N5S1 370 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 GPR150Q8NGU9 434 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 NCSTNQ92542 709 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 RSC1A1Q92681 617 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 RTP4Q96DX8 246 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 AHCYL2Q96HN2 611 aaKnown RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SPRY4Q9C004 299 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 B3GNT4Q9C0J1 378 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 IL26Q9NPH9 171 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SIDT1Q9NXL6 827 aaKnown RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 SLC39A1Q9NY26 324 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 AKAP7Q9P0M2 348 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-208ENST00000494728 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 WDR37Q9Y2I8 494 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 FER1L5A0AVI2 2057 aa11.47□□□□□ -0.57
VTI1A-208ENST00000494728 KIR2DS5A0A0G2JLQ3 304 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 A0A0G2JNG1 304 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 B4E171 279 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 B8ZZF3 427 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 KIR2DS3K7RE56 304 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 RAD1O60671 282 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 ZNF7P17097 686 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TYRP1P17643 537 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 HMGCLP35914 325 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TSPAN7P41732 249 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 MAGEA1P43355 309 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 NR2C2P49116 596 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 CLCNKAP51800 687 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 EPHA4P54764 986 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TFDP2Q14188 446 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 KIR2DS5Q14953 304 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TMEM164Q5U3C3 297 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 PDPK2PQ6A1A2 396 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 C11orf63Q6NUN7 778 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 AADACL2Q6P093 401 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 FAM151BQ6UXP7 276 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 LRRTM4Q86VH4 590 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 UNC5BQ8IZJ1 945 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 IPMKQ8NFU5 416 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 VPS35Q96QK1 796 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 DPYSL5Q9BPU6 564 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 FAM118BQ9BPY3 351 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TIMM29Q9BSF4 260 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 HEMGNQ9BXL5 484 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 KLHL8Q9P2G9 620 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 FAM153AQ9UHL3 310 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 REXO2Q9Y3B8 237 aaKnown RBP11.46□□□□□ -0.57
VTI1A-208ENST00000494728 PCDHA13Q9Y5I0 950 aa11.46□□□□□ -0.57
VTI1A-208ENST00000494728 SPTAN1Q13813 2472 aaKnown RBP11.45□□□□□ -0.58
VTI1A-208ENST00000494728 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 ZW10O43264 779 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 KIF1CO43896 1103 aaKnown RBP11.45□□□□□ -0.58
VTI1A-208ENST00000494728 UGT1A9O60656 530 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 C9P02748 559 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 ITGB2P05107 769 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 ZNF28P17035 718 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 XRCC1P18887 633 aaPredicted RBP11.45□□□□□ -0.58
VTI1A-208ENST00000494728 UGT1A6P19224 532 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 UGT1A1P22309 533 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 UGT1A4P22310 534 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 SH3BP2P78314 561 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 MC2RQ01718 297 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 NFATC3Q12968 1075 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 GPR18Q14330 331 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 SLC1A5Q15758 541 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 CHRNA6Q15825 494 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 ODF2Q5BJF6 829 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 TMEM26Q6ZUK4 368 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 SLC9B2Q86UD5 537 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 TRAPPC5Q8IUR0 188 aa11.45□□□□□ -0.58
VTI1A-208ENST00000494728 CCDC50Q8IVM0 306 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms