RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 FAM109BQ6ICB4 259 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 FSTL4Q6MZW2 842 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RANBP10Q6VN20 620 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DPY19L3Q6ZPD9 716 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SPPL2CQ8IUH8 684 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DCP1BQ8IZD4 617 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RDM1Q8NG50 284 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZHX1-C8orf76Q96EF9 292 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 WBP1Q96G27 269 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 MARK4Q96L34 752 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PEBP4Q96S96 227 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ITPAQ9BY32 194 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EML4Q9HC35 981 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 WDR6Q9NNW5 1121 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PDLIM7Q9NR12 457 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SDR39U1Q9NRG7 319 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 IARS2Q9NSE4 1012 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RCOR3Q9P2K3 495 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ATP6V1HQ9UI12 483 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 OAS3Q9Y6K5 1087 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 A0A0A0MRY4 1105 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZCWPW2A0A1B0GU75 182 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TOR1BO14657 336 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ABCD4O14678 606 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DLX3O60479 287 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC22A5O76082 557 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SNAPINO95295 136 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ASS1P00966 412 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 POLBP06746 335 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TGFB3P10600 412 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 KPNA2P52292 529 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 VBP1P61758 197 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CYP4F2P78329 520 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RHAGQ02094 409 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EMX2Q04743 252 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RGS1Q08116 209 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CYP4F3Q08477 520 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 UGT3A2Q3SY77 523 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GTDC1Q4AE62 458 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 COLEC12Q5KU26 742 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PXDC1Q5TGL8 231 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 INTS5Q6P9B9 1019 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC46A3Q7Z3Q1 461 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SLC22A15Q8IZD6 547 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 EID3Q8N140 333 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 VWA5B2Q8N398 1253 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ST13P5Q8NFI4 369 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 OR7G3Q8NG95 312 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PPP1R13LQ8WUF5 828 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 LRRC58Q96CX6 371 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ERLEC1Q96DZ1 483 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 L3HYPDHQ96EM0 354 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HEXIM2Q96MH2 286 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SPATA13Q96N96 652 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 TTLL2Q9BWV7 592 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CHRAC1Q9NRG0 131 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ASB4Q9Y574 426 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZFC3H1O60293 1989 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 WDR27A2RRH5 827 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 VPS4BO75351 444 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PTP4A3O75365 173 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SEC22BO75396 215 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PPM1BO75688 479 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CAPN1P07384 714 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 APRTP07741 180 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 RBP1P09455 135 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 H2AFB2P0C5Z0 115 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 NCF1P14598 390 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 PCSK2P16519 638 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 IL7RP16871 459 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZP3P21754 424 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ARL1P40616 181 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZFP36L2P47974 494 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GLUD2P49448 558 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GSK3BP49841 420 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 CACNB3P54284 484 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 NCS1P62166 190 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HYAL2Q12891 473 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 LAPTM5Q13571 262 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GNA13Q14344 377 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 MAPK11Q15759 364 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 AGKQ53H12 422 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 IER5Q5VY09 327 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ZNF470Q6ECI4 717 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 BRAT1Q6PJG6 821 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 BLOC1S3Q6QNY0 202 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DDX53Q86TM3 631 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 SYVN1Q86TM6 617 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 HID1Q8IV36 788 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 APPL2Q8NEU8 664 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DEDD2Q8WXF8 326 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 GPRASP2Q96D09 838 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DCLRE1CQ96SD1 692 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 ORAI2Q96SN7 254 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 OSBPL2Q9H1P3 480 aa4.76□□□□□ -1.65
PRKD3-210ENST00000494667 POLMQ9NP87 494 aaPredicted RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 FARSBQ9NSD9 589 aaKnown RBP4.76□□□□□ -1.65
PRKD3-210ENST00000494667 DDX28Q9NUL7 540 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms