RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SLC19A1P41440 591 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 TNNT3P45378 269 aaPredicted RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 CYP4F2P78329 520 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 OTUD4Q01804 1114 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 OLIG2Q13516 323 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 TRA2AQ13595 282 aaKnown RBP eCLIP9.46□□□□□ -0.9
MSH5-218ENST00000494646 CHRNA6Q15825 494 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 CLPPQ16740 277 aaPredicted RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 RAD9BQ6WBX8 426 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 TMTC1Q8IUR5 882 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 PHYKPLQ8IUZ5 450 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ZNF547Q8IVP9 402 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 TTC30BQ8N4P2 665 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 AGBL5Q8NDL9 886 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ACRBPQ8NEB7 543 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 SH3KBP1Q96B97 665 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 TTC25Q96NG3 672 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 LACRTQ9GZZ8 138 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 SARS2Q9NP81 518 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 IL26Q9NPH9 171 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 LUC7LQ9NQ29 371 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 IL17CQ9P0M4 197 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ZNF624Q9P2J8 865 aaPredicted RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 RSPH14Q9UHP6 348 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ACSL6Q9UKU0 697 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 REXO2Q9Y3B8 237 aaKnown RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 PCDHA3Q9Y5H8 950 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ADGRG1Q9Y653 693 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 KIR2DS5A0A0G2JLQ3 304 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 A0A0G2JNG1 304 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 MACROD2A1Z1Q3 448 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 A6NCN8 305 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 HACD1B0YJ81 288 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 APOC4-APOC2K7ER74 178 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 KIR2DS3K7RE56 304 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 CHUKO15111 745 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 GPR39O43194 453 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 MTSS1O43312 755 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 VEGFDO43915 354 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 ZIC2O95409 532 aaPredicted RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 VIPP01282 170 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 EPOP01588 193 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 APOC2P02655 101 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 PYGMP11217 842 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SLC2A4P14672 509 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 AMD1P17707 334 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 IDSP22304 550 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 CTNNA2P26232 953 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 HMGCLP35914 325 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 CLCNKAP51800 687 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 DCDC1P59894 354 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 MPP3Q13368 585 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 GTF2H3Q13889 308 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 KIR2DS5Q14953 304 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SLC1A5Q15758 541 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SLC14A2Q15849 920 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 ANKS6Q68DC2 871 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 PDPK2PQ6A1A2 396 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 C11orf63Q6NUN7 778 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 DARS2Q6PI48 645 aaKnown RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 TMEM220Q6QAJ8 160 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 FAM151BQ6UXP7 276 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 BBS12Q6ZW61 710 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 GLT6D1Q7Z4J2 308 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 ZNF605Q86T29 641 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 GAS2L3Q86XJ1 694 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 DTX1Q86Y01 620 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 TRIM48Q8IWZ4 208 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 ACTL9Q8TC94 416 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 NAT14Q8WUY8 206 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SNRNP27Q8WVK2 155 aaKnown RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 EXTL1Q92935 676 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 NKD1Q969G9 470 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SGF29Q96ES7 293 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 MRFAP1L1Q96HT8 127 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 QKIQ96PU8 341 aaKnown RBP eCLIP9.45□□□□□ -0.9
MSH5-218ENST00000494646 PANX2Q96RD6 677 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 VAT1Q99536 393 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 DPYSL5Q9BPU6 564 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 APOL2Q9BQE5 337 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 FICDQ9BVA6 458 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 OSBPL8Q9BZF1 889 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 APMAPQ9HDC9 416 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 PDP2Q9P2J9 529 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 TRHDEQ9UKU6 1024 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 SLC30A1Q9Y6M5 507 aa9.45□□□□□ -0.9
MSH5-218ENST00000494646 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 ZNF106Q9H2Y7 1883 aaKnown RBP9.45□□□□□ -0.9
MSH5-218ENST00000494646 GLYATL1P3A0A0U1RQE8 302 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 A0A0U1RQJ8 604 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 OR52A4PA6NMU1 304 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 STMND1H3BQB6 276 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 STX7O15400 261 aaKnown RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 KCNN4O15554 427 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 POP7O75817 140 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms