RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GKAP1Q5VSY0 366 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 KRT79Q5XKE5 535 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ADALQ6DHV7 355 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 KRT80Q6KB66 452 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM72DQ6L9T8 149 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RGMBQ6NW40 437 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ANKRD54Q6NXT1 300 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RHBDF2Q6PJF5 856 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 DLK2Q6UY11 383 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SLC36A4Q6YBV0 504 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 GLDNQ6ZMI3 551 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PQLC2Q6ZP29 291 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TUBA1AQ71U36 451 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TRMT1LQ7Z2T5 733 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 C16orf82Q7Z2V1 217 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 HAPLN4Q86UW8 402 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FAM72BQ86X60 149 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC13Q8IYE1 715 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 THNSL1Q8IYQ7 743 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RNF113BQ8IZP6 322 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SPATA6LQ8N4H0 392 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RFLNBQ8N5W9 214 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SYT2Q8N9I0 419 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 IL17RCQ8NAC3 791 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TDRD5Q8NAT2 981 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 CLEC18CQ8NCF0 446 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RDM1Q8NG50 284 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 GSDMBQ8TAX9 411 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ARHGEF26Q96DR7 871 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TUBA1CQ9BQE3 449 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 NEURL2Q9BR09 285 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 HAUS8Q9BT25 410 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 APOL6Q9BWW8 343 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 KRTAP1-5Q9BYS1 174 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 C2orf40Q9H1Z8 148 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PDZD7Q9H5P4 517 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 ESRP2Q9H6T0 727 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 PPP1R3EQ9H7J1 279 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 POLR1BQ9H9Y6 1135 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SLC28A3Q9HAS3 691 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 TCF7L2Q9NQB0 619 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 RRP7BPQ9NSQ0 103 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 MRGBPQ9NV56 204 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 WSB2Q9NYS7 404 aaPredicted RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SLC9A2Q9UBY0 812 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 SEC63Q9UGP8 760 aaKnown RBP2.36□□□□□ -2.03
LMNB1-207ENST00000494185 FLT1P17948 1338 aa2.36□□□□□ -2.03
LMNB1-207ENST00000494185 A0A1W2PS18 150 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 TCRBV21S2A2A0A5A6 115 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CPED1A4D0V7 1026 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 OR2A25A4D2G3 310 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 A8MV72 311 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CTDSP2O14595 271 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 VCYO14598 125 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 LINC01565O15544 149 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PAPSS1O43252 624 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PLRG1O43660 514 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FGF17O60258 216 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 NDUFS7O75251 213 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PMS2P2O95744 297 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FTCDO95954 541 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 F7P08709 466 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC175P0C221 793 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 RNF224P0DH78 156 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 MYBL1P10243 752 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 SELLP14151 372 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 IFNAR1P17181 557 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 POLR2CP19387 275 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 ATP5DP30049 168 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 BDKRB2P30411 391 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CAPZA2P47755 286 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 LIG4P49917 911 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PNLIPRP2P54317 469 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PSMC6P62333 389 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 UBXN2AP68543 259 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PHEXP78562 749 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 BNC1Q01954 994 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CEBPZQ03701 1054 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 DLG1Q12959 904 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 GRIK2Q13002 908 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 GAGE5Q13069 117 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 GAGE6Q13070 117 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 TRAF3Q13114 568 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 COG2Q14746 738 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 NAB2Q15742 525 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC6Q16204 474 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 EIF2S3LQ2VIR3 472 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 KCNT1Q5JUK3 1230 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FAM69BQ5VUD6 431 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 HIST2H2BCQ6DN03 193 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 HIST2H2BDQ6DRA6 164 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 DENND5BQ6ZUT9 1274 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 DPPA4Q7L190 304 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CHST3Q7LGC8 479 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 NR2C2APQ86WQ0 139 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 SNX32Q86XE0 403 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 KMT5CQ86Y97 462 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 LINC00346Q8IVM7 164 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 OR8H3Q8N146 312 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 MUC20Q8N307 709 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms