RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CLDN25C9JDP6 229 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 CLDN5O00501 218 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 PRODHO43272 600 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 DAW1Q8N136 415 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 C11orf24Q96F05 449 aaPredicted RBP19.97■□□□□ 0.79
RNF40-203ENST00000493683 EXOC2Q96KP1 924 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 MNTQ99583 582 aa19.97■□□□□ 0.79
RNF40-203ENST00000493683 C22orf31O95567 290 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 L1CAMP32004 1257 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 MKL2Q9ULH7 1088 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 KCNU1A8MYU2 1149 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 H3BM21 787 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 SCN2BO60939 215 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 ZBTB11O95625 1053 aaPredicted RBP19.96■□□□□ 0.79
RNF40-203ENST00000493683 ALDH4A1P30038 563 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 TAF8Q7Z7C8 310 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 IPPKQ9H8X2 491 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 TLL2Q9Y6L7 1015 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 RLN1P04808 185 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 TIE1P35590 1138 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 UGCGQ16739 394 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 IL23RQ5VWK5 629 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 CACUL1Q86Y37 369 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 RAB2BQ8WUD1 216 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 KLHL5Q96PQ7 755 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 PHF12Q96QT6 1004 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 OAS3Q9Y6K5 1087 aaKnown RBP19.96■□□□□ 0.79
RNF40-203ENST00000493683 POU5F1Q01860 360 aaKnown RBP19.96■□□□□ 0.79
RNF40-203ENST00000493683 GRB14Q14449 540 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 FIBCD1Q8N539 461 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 TMCO6Q96DC7 493 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 TAS2R7Q9NYW3 318 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 UPB1Q9UBR1 384 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 CIDEBQ9UHD4 219 aa19.96■□□□□ 0.79
RNF40-203ENST00000493683 RBM7Q9Y580 266 aaKnown RBP19.96■□□□□ 0.79
RNF40-203ENST00000493683 ZNF132P52740 706 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 NDST2P52849 883 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 RALGDSQ12967 914 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 ATXN7L2Q5T6C5 722 aaPredicted RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 KIAA1324Q6UXG2 1013 aaKnown RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 PHYKPLQ8IUZ5 450 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 RGL4Q8IZJ4 473 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 FCRL4Q96PJ5 515 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 DENND2DQ9H6A0 471 aaPredicted RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 SP140LQ9H930 580 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 RAI2Q9Y5P3 530 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 XKRYO14609 159 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 PGRP06401 933 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 LAMP2P13473 410 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 NDUFA9Q16795 377 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 C6orf52Q5T4I8 152 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TATDN1Q6P1N9 297 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 LAPTM4BQ86VI4 370 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 CBR4Q8N4T8 237 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 IL31RAQ8NI17 732 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 ZNF563Q8TA94 476 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TRIM2Q9C040 744 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 PDE10AQ9Y233 779 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 U3KQV3 271 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TFECO14948 347 aaPredicted RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 PIAS1O75925 651 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 S100A6P06703 90 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 SIM2Q14190 667 aaPredicted RBP19.95■□□□□ 0.78
RNF40-203ENST00000493683 VPS26BQ4G0F5 336 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TTPALQ9BTX7 342 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 MED28Q9H204 178 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 MFSD1Q9H3U5 465 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 FAM25EA8MYX2 175 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TEX46H3BTG2 121 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 MATN3O15232 486 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 AP2A2O94973 939 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 DPY19L1Q2PZI1 675 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 MED27Q6P2C8 311 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 RHBDF2Q6PJF5 856 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TMEM192Q8IY95 271 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 GRPEL2Q8TAA5 225 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 PIGXQ8TBF5 258 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 TCF25Q9BQ70 676 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 CDADC1Q9BWV3 514 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 CXorf21Q9HAI6 301 aa19.95■□□□□ 0.78
RNF40-203ENST00000493683 E9PAM4 449 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 AIREO43918 545 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 GIMD1P0DJR0 217 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 IGFALSP35858 605 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 PBX3P40426 434 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 ECM1Q16610 540 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 IPCEF1Q8WWN9 437 aaPredicted RBP19.94■□□□□ 0.78
RNF40-203ENST00000493683 CLIP3Q96DZ5 547 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 ZNF347Q96SE7 839 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 CCNB2O95067 398 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 NELFEP18615 380 aaKnown RBP19.94■□□□□ 0.78
RNF40-203ENST00000493683 SUZ12Q15022 739 aaKnown RBP19.94■□□□□ 0.78
RNF40-203ENST00000493683 GPR158Q5T848 1215 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 MAGEH1Q9H213 219 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 ZBTB6Q15916 424 aa19.94■□□□□ 0.78
RNF40-203ENST00000493683 NOL9Q5SY16 702 aaKnown RBP19.94■□□□□ 0.78
RNF40-203ENST00000493683 GPR142Q7Z601 462 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms