RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 AP2A2O94973 939 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 KLHL2O95198 593 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 PCDH8O95206 1070 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 PROCP04070 461 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 CCT5P48643 541 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 CLCN7P51798 805 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 SLC12A2P55011 1212 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 PPP2CBP62714 309 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 PPP2CAP67775 309 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 WSCD2Q2TBF2 565 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 TMEM151AQ8N4L1 468 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 CLDN19Q8N6F1 224 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 OR14C36Q8NHC7 312 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 CD200R1Q8TD46 325 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 HMGB4Q8WW32 186 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 GPR21Q99679 349 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 VPS11Q9H270 941 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 CCDC68Q9H2F9 335 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
VPS52-220ENST00000493674 SGK2Q9HBY8 427 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
VPS52-220ENST00000493674 ZNF358Q9NW07 568 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 NKIRAS1Q9NYS0 192 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 TAS2R13Q9NYV9 303 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 KLHL42Q9P2K6 505 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 GALPQ9UBC7 116 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 MBD1Q9UIS9 605 aaPredicted RBP12.51□□□□□ -0.41
VPS52-220ENST00000493674 GRID1Q9ULK0 1009 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 DHRS7Q9Y394 339 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
VPS52-220ENST00000493674 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 TARM1B6A8C7 271 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 LATO43561 262 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 VPS26AO75436 327 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 RHOBTB1O94844 696 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TSPAN12O95859 305 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 ACADMP11310 421 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 SAT1P21673 171 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 ACSL1P33121 698 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TRIM23P36406 574 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 SKIV2L2P42285 1042 aaKnown RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 GBX1Q14549 363 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 IRF4Q15306 451 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TSNAXIP1Q2TAA8 658 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 ZNF658BQ4V348 819 aaPredicted RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 CWF19L1Q69YN2 538 aaKnown RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 PNCKQ6P2M8 343 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 PHYKPLQ8IUZ5 450 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 ANKRD42Q8N9B4 389 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 PLA2G15Q8NCC3 412 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 DENND6BQ8NEG7 585 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 FLCNQ8NFG4 579 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 OR2T34Q8NGX1 318 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 GANCQ8TET4 914 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 KCTD4Q8WVF5 259 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 LENG8Q96PV6 779 aaPredicted RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 FAM111AQ96PZ2 611 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 FAM126AQ9BYI3 521 aaPredicted RBP12.5□□□□□ -0.41
VPS52-220ENST00000493674 GPAMQ9HCL2 828 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TMEM216Q9P0N5 145 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 DLGAP2Q9P1A6 1054 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 TLK1Q9UKI8 766 aa12.5□□□□□ -0.41
VPS52-220ENST00000493674 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 FAM86C2PA6NEL3 165 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 A6NNZ2 444 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 QSOX1O00391 747 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 LILRB5O75023 590 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 LTA4HP09960 611 aaKnown RBP12.49□□□□□ -0.41
VPS52-220ENST00000493674 SBK3P0C264 359 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 ATP1B2P14415 290 aaPredicted RBP12.49□□□□□ -0.41
VPS52-220ENST00000493674 IGFALSP35858 605 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 MAGEA9P43362 315 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 GPR1P46091 355 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 SERPINB4P48594 390 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 PRLHRP49683 370 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 NUBP1P53384 320 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
VPS52-220ENST00000493674 LRRC14Q15048 493 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 BCL7AQ4VC05 210 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 TECRLQ5HYJ1 363 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
VPS52-220ENST00000493674 PAQR3Q6TCH7 311 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms