RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 MATN3O15232 486 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RIPK2O43353 540 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 HTRA2O43464 458 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 PRAMEF10O60809 474 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 BANF1O75531 89 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TCEA3O75764 348 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 FGF1P05230 155 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CEACAM5P06731 702 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 APRTP07741 180 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 ELFN1P0C7U0 828 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CCL4P13236 92 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CCNB1P14635 433 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TPSB2P20231 275 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RBMS1P29558 406 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 SERPINA4P29622 427 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CD68P34810 354 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 MAGEA4P43358 317 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 MAGEA6P43360 314 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CSNK1DP48730 415 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 LMAN1P49257 510 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 INHBCP55103 352 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 ARL4CP56559 192 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TMPRSS3P57727 454 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 KIAA1024LP59773 190 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 ZFP36L1Q07352 338 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 IL10RBQ08334 325 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 VAC14Q08AM6 782 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 PDIA2Q13087 525 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TPSAB1Q15661 275 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 HIF1AQ16665 826 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 PARP6Q2NL67 630 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TAF1BQ53T94 588 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CERCAMQ5T4B2 595 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TIGD7Q6NT04 549 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 ERAP2Q6P179 960 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 OGFOD3Q6PK18 319 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 DOK6Q6PKX4 331 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 USP53Q70EK8 1073 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CENPUQ71F23 418 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TRMT10CQ7L0Y3 403 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RAB11FIP2Q7L804 512 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 SPRED1Q7Z699 444 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 HEATR4Q86WZ0 1026 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 LRRC49Q8IUZ0 686 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 CCNJLQ8IV13 435 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 SLITRK4Q8IW52 837 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 FSTL5Q8N475 847 aaPredicted RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 FBXO39Q8N4B4 442 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 HCAR2Q8TDS4 363 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 NAT6Q93015 286 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TEKT5Q96M29 485 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 PSKH2Q96QS6 385 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 GFM1Q96RP9 751 aaKnown RBP10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TUBGCP5Q96RT8 1024 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 VAT1Q99536 393 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 ATP13A3Q9H7F0 1226 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 FAM53CQ9NYF3 392 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 NINJ2Q9NZG7 142 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 LRIT1Q9P2V4 623 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 RSPH14Q9UHP6 348 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TRHDEQ9UKU6 1024 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 TMEM98Q9Y2Y6 226 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 LOXL2Q9Y4K0 774 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 DGKBQ9Y6T7 804 aa10.14□□□□□ -0.79
SOX2-OT-215ENST00000493521 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 TRBV23OR9-2A0A075B6M9 112 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 E7ESA3 106 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 ERVH48-1M5A8F1 160 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 TK2O00142 265 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 PPM1DO15297 605 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 EIF3HO15372 352 aaKnown RBP eCLIP10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 ACSL3O95573 720 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 ITGA2BP08514 1039 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 NFKB1P19838 968 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 CSF2RBP32927 897 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 GNPDA1P46926 289 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 IFI35P80217 286 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 DSC2Q02487 901 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 GPS2Q13227 327 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 SLC29A2Q14542 456 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 FASTKD3Q14CZ7 662 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 KYNUQ16719 465 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 BBS9Q3SYG4 887 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 AMZ1Q400G9 498 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 MSS51Q4VC12 460 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 C14orf28Q4W4Y0 310 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 HP1BP3Q5SSJ5 553 aaPredicted RBP10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 TMCO4Q5TGY1 634 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 ITPRIPL1Q6GPH6 555 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 SLC30A9Q6PML9 568 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 PPP1R21Q6ZMI0 780 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 TECPR1Q7Z6L1 1165 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 GKN2Q86XP6 184 aa10.13□□□□□ -0.79
SOX2-OT-215ENST00000493521 ZBED8Q8IZ13 594 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms