RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PCDH9Q9HC56 1237 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 SLC35C2Q9NQQ7 365 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 PLSCR4Q9NRQ2 329 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 DNAJB4Q9UDY4 337 aa3.89□□□□□ -1.79
CLK1-213ENST00000492793 DOCK7Q96N67 2140 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 PLSCR5A0PG75 271 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 LNP1A1A4G5 178 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SH2B2O14492 632 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 ADAMDEC1O15204 470 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ADAM20O43506 726 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ZNF217O75362 1048 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 PGM3O95394 542 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ABCB1P08183 1280 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 KRT19P08727 400 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 LINC00271P0C7V0 271 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 DAOP14920 347 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 MYOD1P15172 320 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 S1PR1P21453 382 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 UGT1A1P22309 533 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 HRH2P25021 359 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 TNFRSF8P28908 595 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 MMP14P50281 582 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ARSEP51690 589 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SNRPEP62304 92 aaKnown RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 ZXDBP98169 803 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 PLIN5Q00G26 463 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SLC20A2Q08357 652 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SETMARQ53H47 684 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 NADSYN1Q6IA69 706 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 NAA16Q6N069 864 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 SLC30A6Q6NXT4 461 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 INTS8Q75QN2 995 aaKnown RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 NRROSQ86YC3 692 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 MCEMP1Q8IX19 187 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 PM20D2Q8IYS1 436 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 FBXO39Q8N4B4 442 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SYT2Q8N9I0 419 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 KCTD6Q8NC69 237 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 OR5R1Q8NH85 324 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 LILRB1Q8NHL6 650 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 THAP6Q8TBB0 222 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 NUDCD2Q8WVJ2 157 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 FIG4Q92562 907 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SECISBP2LQ93073 1101 aaKnown RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 ZNF385AQ96PM9 386 aaKnown RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 WACQ9BTA9 647 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SEMA6AQ9H2E6 1030 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 C6orf106Q9H6K1 298 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 POU2F3Q9UKI9 436 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ZNF148Q9UQR1 794 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 SMCHD1A6NHR9 2005 aa3.88□□□□□ -1.79
CLK1-213ENST00000492793 ZNF644Q9H582 1327 aaPredicted RBP3.88□□□□□ -1.79
CLK1-213ENST00000492793 A0A1W2PR77 199 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TMEM8BA6NDV4 472 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 GLOD5A6NK44 160 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 PLK4O00444 970 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 PAPSS1O43252 624 aaPredicted RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 SMAD6O43541 496 aaKnown RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 NR2F1P10589 423 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TRIM21P19474 475 aaKnown RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 CAPZA2P47755 286 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 THBS3P49746 956 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 ART1P52961 327 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 UBXN2AP68543 259 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 PLA2G7Q13093 441 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 RASA2Q15283 850 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 SYT16Q17RD7 645 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 ZNF585BQ52M93 769 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 GARNL3Q5VVW2 1013 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 OR7E24Q6IFN5 339 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 RAD9BQ6WBX8 426 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TPRG1Q6ZUI0 275 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 HAUS6Q7Z4H7 955 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 PRPF39Q86UA1 669 aaKnown RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 TMPRSS12Q86WS5 348 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 GALNT13Q8IUC8 556 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 ZDHHC17Q8IUH5 632 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 CEP97Q8IW35 865 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 SAMD14Q8IZD0 417 aaPredicted RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 POGLUT1Q8NBL1 392 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 BBS10Q8TAM1 723 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TBC1D16Q8TBP0 767 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 ABTB1Q969K4 478 aaPredicted RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 BICD1Q96G01 975 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 CCDC106Q9BWC9 280 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 SPRY4Q9C004 299 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 SPATC1LQ9H0A9 340 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 IL25Q9H293 177 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 LRRC4Q9HBW1 653 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 WSB2Q9NYS7 404 aaPredicted RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 LARSQ9P2J5 1176 aaKnown RBP3.87□□□□□ -1.79
CLK1-213ENST00000492793 MORF4L1Q9UBU8 362 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 AMACRQ9UHK6 382 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 NRBP1Q9UHY1 535 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 TSPYL4Q9UJ04 414 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms