RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TCP10LQ8TDR4 215 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ACMSDQ8TDX5 336 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC20A1Q8WUM9 679 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 C10orf82Q8WW14 230 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 JPH3Q8WXH2 748 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LZICQ8WZA0 190 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 IRGQQ8WZA9 623 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LPAR1Q92633 364 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SEMA4DQ92854 862 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MCUR1Q96AQ8 359 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC127Q96BQ5 260 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PPP1R14BQ96C90 147 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF653Q96CK0 615 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LRRC39Q96DD0 335 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MTBPQ96DY7 904 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CMTM5Q96DZ9 223 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DTNBP1Q96EV8 351 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF333Q96JL9 665 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ZBTB45Q96K62 511 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CEP170P1Q96L14 293 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 C9orf72Q96LT7 481 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 OLFM3Q96PB7 478 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LENG8Q96PV6 779 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TRAPPC9Q96Q05 1148 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SNX18Q96RF0 628 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TAAR1Q96RJ0 339 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SYT15Q9BQS2 421 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CBWD1Q9BRT8 395 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LXNQ9BS40 222 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TSSK1BQ9BXA7 367 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 C1QTNF7Q9BXJ2 289 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HEMGNQ9BXL5 484 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 FSD1LQ9BXM9 530 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CADM1Q9BY67 442 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAI2Q9GZS0 605 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MYLK2Q9H1R3 596 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DENND2DQ9H6A0 471 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DHX33Q9H6R0 707 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TDRD3Q9H7E2 651 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SUDS3Q9H7L9 328 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CXorf36Q9H7Y0 433 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 VPS37BQ9H9H4 285 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KIF9Q9HAQ2 790 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KCNK13Q9HB14 408 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SAYSD1Q9NPB0 183 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DMAP1Q9NPF5 467 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ABCF3Q9NUQ8 709 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ARL8BQ9NVJ2 186 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 THAP1Q9NVV9 213 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ASNSD1Q9NWL6 643 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 WWOXQ9NZC7 414 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TMOD2Q9NZR1 351 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HACD3Q9P035 362 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CPSF2Q9P2I0 782 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NKX1-2Q9UD57 310 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TCEAL9Q9UHQ7 104 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ANAPC7Q9UJX3 599 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 AGO2Q9UKV8 859 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 OGDHLQ9ULD0 1010 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CHKBQ9Y259 395 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LRCH1Q9Y2L9 728 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PLLPQ9Y342 182 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ASB3Q9Y575 518 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HEMK1Q9Y5R4 338 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TEX264Q9Y6I9 313 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GREB1LQ9C091 1923 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CICQ96RK0 1608 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MROH7Q68CQ1 1323 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ADGRA3Q8IWK6 1321 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CNTNAP2Q9UHC6 1331 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CROCCQ5TZA2 2017 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NUP205Q92621 2012 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MYO18AQ92614 2054 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MAST2Q6P0Q8 1798 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TAF1LQ8IZX4 1826 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SHROOM3Q8TF72 1996 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 NHSL1Q5SYE7 1610 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TNRC6CQ9HCJ0 1690 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TCRBV5S1A1TA0A578 114 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 BCLAF3A2AJT9 711 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RGSL1A5PLK6 1076 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GOLGA8IPA6NC78 632 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SDR42E2A6NKP2 422 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GOLGA8JA6NMD2 632 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM233B4DJY2 109 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 BTBD19C9JJ37 291 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 F8VP50 259 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SPECC1L-ADORA2AF8WAN1 911 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 H0YJX3 145 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 K7ENM7 598 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SGK1O00141 431 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 AP3B1O00203 1094 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 COPEO14579 308 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ADAM10O14672 748 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 WDR46O15213 610 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CHADO15335 359 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMD3O43242 534 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 DENRO43583 198 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM189A1O60320 539 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms