RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ASPDHA6ND91 283 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 DVL1O14640 695 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 BUD23O43709 281 aaKnown RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 DDNO94850 711 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 ATP1A1P05023 1023 aaKnown RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 F7P08709 466 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 FAM106CPP0CH98 169 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 HLA-DOBP13765 273 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 ACADLP28330 430 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 GCH1P30793 250 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 HOXD13P35453 343 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 DVL1P1P54792 670 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 CUL4AQ13619 759 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 KCNC3Q14003 757 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 DUSP28Q4G0W2 176 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 KRTCAP3Q53RY4 240 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 PLEKHS1Q5SXH7 462 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 RARS2Q5T160 578 aaKnown RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 SPATA1Q5VX52 437 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 GDPD4Q6W3E5 623 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 CFAP77Q6ZQR2 320 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 ASB18Q6ZVZ8 466 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 SZRD1Q7Z422 152 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 RFLNBQ8N5W9 214 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 SLC5A8Q8N695 610 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 SLC44A1Q8WWI5 657 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 SRSF8Q9BRL6 282 aaKnown RBP4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 TBC1D29Q9UFV1 150 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 LRP12Q9Y561 859 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 RPS6KL1Q9Y6S9 549 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 TAF1P21675 1872 aa4.74□□□□□ -1.65
HMGB1P38-201ENST00000490557 CNTNAP2Q9UHC6 1331 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 CDRT15L2A8MXV6 281 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 C16orf97H3BN30 126 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 PLPP2O43688 288 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 KRT36O76013 467 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 GFPT2O94808 682 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 CSH1P0DML2 217 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 CSH2P0DML3 217 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 SAT1P21673 171 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 FUT6P51993 359 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 CTSCP53634 463 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 PRKG2Q13237 762 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 KRT33BQ14525 404 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 MEA1Q16626 185 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 MEP1AQ16819 746 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 PDSS1Q5T2R2 415 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 TMEM198Q66K66 360 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 BHLHA9Q7RTU4 235 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 PCGF5Q86SE9 256 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 SCYL3Q8IZE3 742 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 RDM1Q8NG50 284 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 OR13A1Q8NGR1 328 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 JAKMIP2Q96AA8 810 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 NEUROD6Q96NK8 337 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 CCDC68Q9H2F9 335 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 ZNF556Q9HAH1 456 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 TCP11L1Q9NUJ3 509 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 NSMCE4AQ9NXX6 385 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 MAP3K20Q9NYL2 800 aaKnown RBP4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 DONSONQ9NYP3 566 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 TMEM5Q9Y2B1 443 aa4.73□□□□□ -1.65
HMGB1P38-201ENST00000490557 A0A1W2PQ09 198 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 hCG_1807616A0A1W2PRN6 198 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 A0A1W2PS18 150 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 OR5K3A6NET4 321 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 C15orf62A8K5M9 175 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 ANKRD66B4E2M5 251 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 TMEM178BH3BS89 294 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 CCER2I3L3R5 266 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 CTDSP2O14595 271 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 EIF3DO15371 548 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 GH2P01242 217 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 SLC15A1P46059 708 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 MLLT10P55197 1068 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 CD81P60033 236 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 MRPS5P82675 430 aaKnown RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 MVPQ14764 893 aaKnown RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 ACCSLQ4AC99 568 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 RAB41Q5JT25 222 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 LCN10Q6JVE6 187 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 FAM171BQ6P995 826 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 TPRG1Q6ZUI0 275 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 FOXL2NBQ6ZUU3 175 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 C9orf139Q6ZV77 190 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 KCTD8Q6ZWB6 473 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 DMBX1Q8NFW5 382 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 PHF21AQ96BD5 680 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 ZNF583Q96ND8 569 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 DDOQ99489 341 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 LRRC1Q9BTT6 524 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 POLR3CQ9BUI4 534 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 TCF7L2Q9NQB0 619 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 MARCH4Q9P2E8 410 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 POLG2Q9UHN1 485 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 EXO1Q9UQ84 846 aaKnown RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 B3GALT5Q9Y2C3 310 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms