RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ITGA7	Q13683	1181 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CAMK1	Q14012	370 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	IL13RA2	Q14627	380 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CRYM	Q14894	314 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PDK1	Q15118	436 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TRADD	Q15628	312 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	C15orf59	Q2T9L4	293 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	AP5B1	Q2VPB7	878 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SYTL3	Q4VX76	610 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RUNDC3A	Q59EK9	446 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	C6orf10	Q5SRN2	563 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	FAM171A1	Q5VUB5	890 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	DAB2IP	Q5VWQ8	1189 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SLC25A24	Q6NUK1	477 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	AAGAB	Q6PD74	315 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	INO80C	Q6PI98	192 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	ZYG11A	Q6WRX3	759 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	COLCA1	Q6ZS62	124 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	INTS8	Q75QN2	995 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	MARK2	Q7KZI7	788 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	UNC5CL	Q8IV45	518 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	LINC00346	Q8IVM7	164 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CDH26	Q8IXH8	852 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	ADGRF2	Q8IZF7	708 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	MAML2	Q8IZL2	1156 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	SIX6OS1	Q8N1H7	587 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RTL3	Q8N8U3	475 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	MRPL43	Q8N983	215 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	SPERT	Q8NA61	448 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	POC5	Q8NA72	575 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	BBOF1	Q8ND07	529 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	NEK11	Q8NG66	645 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	OR52K1	Q8NGK4	314 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PSMA8	Q8TAA3	256 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	FAR1	Q8WVX9	515 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SLC5A11	Q8WWX8	675 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RAPGEF5	Q92565	580 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	INPP5D	Q92835	1189 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	MR1	Q95460	341 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	EPSTI1	Q96J88	318 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CNOT6L	Q96LI5	555 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	CAMK1G	Q96NX5	476 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RUFY1	Q96T51	708 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	FUZ	Q9BT04	418 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TBCD	Q9BTW9	1192 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CADM1	Q9BY67	442 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	GCOM2	Q9BZD3	368 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	TRIM7	Q9C029	511 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	LRRCC1	Q9C099	1032 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	NYX	Q9GZU5	481 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	FAM234A	Q9H0X4	552 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TAOK3	Q9H2K8	898 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SH2D4A	Q9H788	454 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	VCPKMT	Q9H867	229 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	KAT14	Q9H8E8	782 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	ACTR5	Q9H9F9	607 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	MRPL44	Q9H9J2	332 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	PNRC2	Q9NPJ4	139 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	TRPV5	Q9NQA5	729 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	2.56	□□□□□ -2	2e-6	■■■■■ 30.5
PUM3-204	ENST00000490444	HOMER3	Q9NSC5	361 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RNF146	Q9NTX7	359 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	GIMAP4	Q9NUV9	329 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	UBAP1	Q9NZ09	502 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CWC15	Q9P013	229 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	MARCH4	Q9P2E8	410 aa	Predicted RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	NLK	Q9UBE8	527 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	FBXO40	Q9UH90	709 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	LIMA1	Q9UHB6	759 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	FAM153A	Q9UHL3	310 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PRDM4	Q9UKN5	801 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	PROCR	Q9UNN8	238 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SLC8A2	Q9UPR5	921 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	LIPT1	Q9Y234	373 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	RAI2	Q9Y5P3	530 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	KCNE2	Q9Y6J6	123 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	CAPN7	Q9Y6W3	813 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	2.56	□□□□□ -2
PUM3-204	ENST00000490444	IGSF1	Q8N6C5	1336 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	NSD2	O96028	1365 aa		2.56	□□□□□ -2
PUM3-204	ENST00000490444	TMEM272	A0A1B0GTI8	110 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	DPPA5	A6NC42	116 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	NPIPB15	A6NHN6	443 aa	Predicted RBP	2.55	□□□□□ -2
PUM3-204	ENST00000490444	GLOD5	A6NK44	160 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	SH2D7	A6NKC9	451 aa	Predicted RBP	2.55	□□□□□ -2
PUM3-204	ENST00000490444	TMCO5B	A8MYB1	307 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444		L7N2F9	121 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	DNM1L	O00429	736 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	PEX12	O00623	359 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	CTDSP2	O14595	271 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	SMAD6	O43541	496 aa	Known RBP	2.55	□□□□□ -2
PUM3-204	ENST00000490444	GMFG	O60234	142 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	NMT2	O60551	498 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	DAB1	O75553	588 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	PSMD10	O75832	226 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	SLITRK3	O94933	977 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	FGFR1OP	O95684	399 aa	Known RBP	2.55	□□□□□ -2
PUM3-204	ENST00000490444	S100A9	P06702	114 aa	Known RBP	2.55	□□□□□ -2
PUM3-204	ENST00000490444	ASGR1	P07306	291 aa		2.55	□□□□□ -2
PUM3-204	ENST00000490444	ABCB1	P08183	1280 aa	Predicted RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms