RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FOLR1P15328 257 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 TYRP1P17643 537 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 RPL13P26373 211 aaKnown RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 PBX1P40424 430 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 MAPKAPK2P49137 400 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 IST1P53990 364 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SOX8P57073 446 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ADORA2A-AS1P86434 159 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 TUBB3Q13509 450 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ACOX1Q15067 660 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CYTH1Q15438 398 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 KYNUQ16719 465 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 DOK6Q6PKX4 331 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 XKRXQ6PP77 449 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 FAM198BQ6UWH4 519 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 BNIPLQ7Z465 357 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 MRGPREQ86SM8 312 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CEP97Q8IW35 865 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 PPM1KQ8N3J5 372 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ZADH2Q8N4Q0 377 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNF397Q8NF99 534 aaPredicted RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 LMO3Q8TAP4 145 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 PPP4R1Q8TF05 950 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 FNIP1Q8TF40 1166 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CHTF18Q8WVB6 975 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 TM9SF4Q92544 642 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 MR1Q95460 341 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC35C1Q96A29 364 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 NUS1Q96E22 293 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ARSGQ96EG1 525 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SGSM3Q96HU1 749 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC41A2Q96JW4 573 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNF641Q96N77 438 aaPredicted RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 WDR77Q9BQA1 342 aaPredicted RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 TMEM121Q9BTD3 319 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 NLNQ9BYT8 704 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 LDHAL6BQ9BYZ2 381 aaPredicted RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 MAGEH1Q9H213 219 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 NOL6Q9H6R4 1146 aaKnown RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 UCK1Q9HA47 277 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 ACP6Q9NPH0 428 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 WASH6PQ9NQA3 447 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 TMEM248Q9NWD8 314 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CPNE7Q9UBL6 633 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SUCOQ9UBS9 1254 aaKnown RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNHIT2Q9UHR6 403 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 DNAI1Q9UI46 699 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 RARRES3Q9UL19 164 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SMC3Q9UQE7 1217 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 TMEM229AB2RXF0 380 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 BUB1O43683 1085 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 RAMP2O60895 175 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 IPO13O94829 963 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 ERBB2P04626 1255 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 AGAP20933 346 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 ETV3P41162 512 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 CA7P43166 264 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 CAPZBP47756 277 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 SULT1E1P49888 294 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 PPP2R2AP63151 447 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 KCNAB1Q14722 419 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 GRM3Q14832 879 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 CNGA3Q16281 694 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 HIF1AQ16665 826 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 DCAF17Q5H9S7 520 aaPredicted RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 B3GNTL1Q67FW5 361 aaPredicted RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 IGFL2Q6UWQ7 119 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 Q71RC1 249 aaPredicted RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC9B2Q86UD5 537 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TRIM74Q86UV6 250 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 DNAAF5Q86Y56 855 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 CHDHQ8NE62 594 aaPredicted RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNF606Q8WXB4 792 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 RSC1A1Q92681 617 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 NRGNQ92686 78 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 MTFMTQ96DP5 389 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 DTD2Q96FN9 168 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 NSMCE3Q96MG7 304 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 NT5C1BQ96P26 610 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TBCBQ99426 244 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 SMR3AQ99954 134 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 NCAPGQ9BPX3 1015 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 HERPUD2Q9BSE4 406 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 STN1Q9H668 368 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 PDE7BQ9NP56 450 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TNFRSF10DQ9UBN6 386 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 B4GALT6Q9UBX8 382 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 CNOT8Q9UFF9 292 aaKnown RBP6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 HPCAL4Q9UM19 191 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 MAPK8IP1Q9UQF2 711 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TMEM98Q9Y2Y6 226 aa6.99□□□□□ -1.29
PDLIM1-203ENST00000490391 TRGV8A0A0C4DH27 118 aa6.98□□□□□ -1.29
PDLIM1-203ENST00000490391 IGHV5-51A0A0C4DH38 117 aa6.98□□□□□ -1.29
PDLIM1-203ENST00000490391 KIR2DS5A0A0G2JLQ3 304 aa6.98□□□□□ -1.29
PDLIM1-203ENST00000490391 A0A0G2JNG1 304 aa6.98□□□□□ -1.29
PDLIM1-203ENST00000490391 TRIM49BA6NDI0 452 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms