RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TRAPPC5Q8IUR0 188 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 LRRC45Q96CN5 670 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 CCDC97Q96F63 343 aaPredicted RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 CMKLR1Q99788 373 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 ZCCHC2Q9C0B9 1178 aaKnown RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 PRDM8Q9NQV8 689 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 AKAP7Q9P0M2 348 aaPredicted RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 DNAJC16Q9Y2G8 782 aa19.48■□□□□ 0.71
SMC4-222ENST00000490207 R3HDM2Q9Y2K5 976 aaKnown RBP19.48■□□□□ 0.71
SMC4-222ENST00000490207 TCRBV7S2A1N4TA0A589 114 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 C5orf60A6NFR6 353 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 OR5K4A6NMS3 321 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 C2orf81A6NN90 581 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 GAPDHSO14556 408 aaPredicted RBP19.47■□□□□ 0.71
SMC4-222ENST00000490207 DUX1O43812 170 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 ITIH1P19827 911 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 LPOP22079 712 aaPredicted RBP19.47■□□□□ 0.71
SMC4-222ENST00000490207 TMEM115Q12893 351 aaPredicted RBP19.47■□□□□ 0.71
SMC4-222ENST00000490207 NFATC2Q13469 925 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 PTPRCAPQ14761 206 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 C16orf72Q14CZ0 275 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 LDLRAP1Q5SW96 308 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 BROXQ5VW32 411 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 ZNF574Q6ZN55 896 aaPredicted RBP19.47■□□□□ 0.71
SMC4-222ENST00000490207 ZNF547Q8IVP9 402 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 FAM71DQ8N9W8 422 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 AVL9Q8NBF6 648 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 DDHD1Q8NEL9 900 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 OR4D9Q8NGE8 314 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 OR10G6Q8NH81 332 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 SLC35B2Q8TB61 432 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 BRSK1Q8TDC3 778 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 AHCYL2Q96HN2 611 aaKnown RBP19.47■□□□□ 0.71
SMC4-222ENST00000490207 CCDC74BQ96LY2 380 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 TTC25Q96NG3 672 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 DPYSL5Q9BPU6 564 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 DPH1Q9BZG8 443 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 SMOXQ9NWM0 555 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 SLC23A2Q9UGH3 650 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 PCDHGA7Q9Y5G6 932 aa19.47■□□□□ 0.71
SMC4-222ENST00000490207 IGHV5-10-1A0A0J9YXX1 117 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 HGSO14964 777 aaPredicted RBP19.46■□□□□ 0.71
SMC4-222ENST00000490207 KLK10O43240 276 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A9O60656 530 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 PRAMEF1O95521 474 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A6P19224 532 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A1P22309 533 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A4P22310 534 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 SLC5A2P31639 672 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A3P35503 534 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 LIMK2P53671 638 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 GDF10P55107 478 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 SPARCL1Q14515 664 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 SEPT7Q16181 437 aaKnown RBP19.46■□□□□ 0.71
SMC4-222ENST00000490207 GPRC6AQ5T6X5 926 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 KLHDC8BQ8IXV7 354 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 RCBTB1Q8NDN9 531 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 OR4K2Q8NGD2 314 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 SH3KBP1Q96B97 665 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 FCRL3Q96P31 734 aaPredicted RBP19.46■□□□□ 0.71
SMC4-222ENST00000490207 TMEM121Q9BTD3 319 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 PRORYQ9H606 182 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A7Q9HAW7 530 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A10Q9HAW8 530 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 UGT1A8Q9HAW9 530 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 CPNE7Q9UBL6 633 aa19.46■□□□□ 0.71
SMC4-222ENST00000490207 PTPRQQ9UMZ3 2332 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 PRR19A6NJB7 356 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 PDZK1P1A8MUH7 402 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 THRAP10827 490 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 HOXB3P14651 431 aaPredicted RBP19.45■□□□□ 0.7
SMC4-222ENST00000490207 VCLP18206 1134 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 CA5AP35218 305 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 ETV5P41161 510 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 MAPK10P53779 464 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 EPHA4P54764 986 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 SQSTM1Q13501 440 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 TRA2AQ13595 282 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMC4-222ENST00000490207 PARP6Q2NL67 630 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 P3H1Q32P28 736 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 C11orf96Q7Z7L8 435 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.45■□□□□ 0.7
SMC4-222ENST00000490207 TMEM9Q9P0T7 183 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 SCHIP1Q9P0W5 487 aaPredicted RBP19.45■□□□□ 0.7
SMC4-222ENST00000490207 FEZ2Q9UHY8 353 aaPredicted RBP19.45■□□□□ 0.7
SMC4-222ENST00000490207 FKBPLQ9UIM3 349 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 KCTD3Q9Y597 815 aa19.45■□□□□ 0.7
SMC4-222ENST00000490207 CRTAMO95727 393 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 CCDC175P0C221 793 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 AKT1P31749 480 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 MAPK9P45984 424 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 UCNP55089 124 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 TMPRSS3P57727 454 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 UBE2IP63279 158 aaKnown RBP19.44■□□□□ 0.7
SMC4-222ENST00000490207 CXADRP78310 365 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 PDE1BQ01064 536 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 CFHR1Q03591 330 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 KCTD11Q693B1 232 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 DENND5AQ6IQ26 1287 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 TMEM71Q6P5X7 295 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms