RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 PBLDP30039 288 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 ARRB1P49407 418 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 HNRNPKP61978 463 aaKnown RBP eCLIP8.18□□□□□ -1.1
SF1-218ENST00000489544 CTBSQ01459 385 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 LAMB3Q13751 1172 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 HLTFQ14527 1009 aaKnown RBP eCLIP8.18□□□□□ -1.1
SF1-218ENST00000489544 CRYMQ14894 314 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 DEFB133Q30KQ1 61 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 PYCR3Q53H96 274 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 FASTKD1Q53R41 847 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 ZNF789Q5FWF6 425 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 LDLRAP1Q5SW96 308 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 KIAA0930Q6ICG6 404 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 TRMT10BQ6PF06 316 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 SLC30A9Q6PML9 568 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 CHST15Q7LFX5 561 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 NRROSQ86YC3 692 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 GALNT13Q8IUC8 556 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 TRAPPC5Q8IUR0 188 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 DENND6AQ8IWF6 608 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 GSPT2Q8IYD1 628 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 ZBED8Q8IZ13 594 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 OXR1Q8N573 874 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 EID2Q8N6I1 236 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 OTUD6BQ8N6M0 293 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 DTX3LQ8TDB6 740 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 PEX13Q92968 403 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 SCARF2Q96GP6 870 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 OR2M4Q96R27 311 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 COPS8Q99627 209 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 RRAGDQ9NQL2 400 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 C20orf96Q9NUD7 363 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 SMOXQ9NWM0 555 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 ZDHHC3Q9NYG2 299 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 VPS18Q9P253 973 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 FAM8A1Q9UBU6 413 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 ZC3H7BQ9UGR2 993 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 KCNK6Q9Y257 313 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 DNAJC16Q9Y2G8 782 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 DGKBQ9Y6T7 804 aa8.18□□□□□ -1.1
SF1-218ENST00000489544 TP53BP1Q12888 1972 aaPredicted RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 TDRD6O60522 2096 aaKnown RBP8.18□□□□□ -1.1
SF1-218ENST00000489544 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 IGLV3-16A0A075B6K0 115 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 MAGEB16A2A368 324 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 IQCF5A8MTL0 148 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 H3BM21 787 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 CHUKO15111 745 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 YY2O15391 372 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 AQP9O43315 295 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 VEGFDO43915 354 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 POP7O75817 140 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 USP1O94782 785 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 EML2O95834 649 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 POLBP06746 335 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 MYBL2P10244 700 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 ITGB6P18564 788 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 SSTR1P30872 391 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 ABCG1P45844 678 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 BLKP51451 505 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 MPP1Q00013 466 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 CTBP1Q13363 440 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 RSPO4Q2I0M5 234 aaPredicted RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 GPR33Q49SQ1 333 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 NEPROQ6NW34 567 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 FAM83HQ6ZRV2 1179 aaPredicted RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 CENPUQ71F23 418 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 TAF8Q7Z7C8 310 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 C11orf96Q7Z7L8 435 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 LILRA3Q8N6C8 439 aaPredicted RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 GPR161Q8N6U8 529 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.17□□□□□ -1.11e-6■■■□□ 15.3
SF1-218ENST00000489544 SETD7Q8WTS6 366 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 PATE1Q8WXA2 126 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 DCUN1D1Q96GG9 259 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 TTC25Q96NG3 672 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 C19orf43Q9BQ61 176 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 FBXO6Q9NRD1 293 aaPredicted RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 FAM114A2Q9NRY5 505 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 IARS2Q9NSE4 1012 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 SPATS2LQ9NUQ6 558 aaKnown RBP8.17□□□□□ -1.1
SF1-218ENST00000489544 SIRPGQ9P1W8 387 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 SPASTQ9UBP0 616 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 ZNF292O60281 2723 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 LRP4O75096 1905 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
SF1-218ENST00000489544 TRBV23OR9-2A0A075B6M9 112 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 UBA6A0AVT1 1052 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms