RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 IYDQ6PHW0 289 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 RBM44Q6ZP01 1051 aaKnown RBP17.1■□□□□ 0.33
MDC1-206ENST00000489540 CCNJLQ8IV13 435 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 SFRP1Q8N474 314 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 Q8N9G6 341 aaPredicted RBP17.1■□□□□ 0.33
MDC1-206ENST00000489540 GRK7Q8WTQ7 553 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 DCUN1D1Q96GG9 259 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 SLC23A2Q9UGH3 650 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
MDC1-206ENST00000489540 LRP4O75096 1905 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 KIR2DS5A0A0G2JLQ3 304 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 A0A0G2JNG1 304 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 KLHL33A6NCF5 533 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 TRABD2BA6NFA1 517 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 KIR2DS3K7RE56 304 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 SNX2O60749 519 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 POP7O75817 140 aaKnown RBP17.09■□□□□ 0.33
MDC1-206ENST00000489540 RPLP0P05388 317 aaKnown RBP17.09■□□□□ 0.33
MDC1-206ENST00000489540 PROS1P07225 676 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 TPSB2P20231 275 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 NPY2RP49146 381 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 CCL7P80098 99 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 SARNPP82979 210 aaKnown RBP17.09■□□□□ 0.33
MDC1-206ENST00000489540 CACNG1Q06432 222 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 GPS1Q13098 491 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 SPIDRQ14159 915 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 KIR2DS5Q14953 304 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 NR1D2Q14995 579 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 CCDC38Q502W7 563 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 ZRANB3Q5FWF4 1079 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 ZNF438Q7Z4V0 828 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 AMZ2Q86W34 360 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 NXPE1Q8N323 547 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 PATE1Q8WXA2 126 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 PEX13Q92968 403 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 GFM1Q96RP9 751 aaKnown RBP17.09■□□□□ 0.33
MDC1-206ENST00000489540 COPS8Q99627 209 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 NRSN2Q9GZP1 204 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 OSGEPL1Q9H4B0 414 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 BFARQ9NZS9 450 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 KNTC1P50748 2209 aa17.09■□□□□ 0.33
MDC1-206ENST00000489540 A6NCN8 305 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 CFAP99D6REC4 459 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 CCL22O00626 93 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
MDC1-206ENST00000489540 F3P13726 295 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 IDSP22304 550 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 MAGEA6P43360 314 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 FASLGP48023 281 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 ISXQ2M1V0 245 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 PLA2G4EQ3MJ16 856 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 PCID2Q5JVF3 399 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 TSTD2Q5T7W7 516 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 LRRC8BQ6P9F7 803 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 WASH2PQ6VEQ5 465 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 TAS2R42Q7RTR8 314 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 SPRED1Q7Z699 444 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 C11orf96Q7Z7L8 435 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 SLC9B2Q86UD5 537 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 PPHLN1Q8NEY8 458 aaKnown RBP17.08■□□□□ 0.32
MDC1-206ENST00000489540 SH3KBP1Q96B97 665 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 IL22Q9GZX6 179 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 FAM96AQ9H5X1 160 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 STN1Q9H668 368 aaKnown RBP17.08■□□□□ 0.32
MDC1-206ENST00000489540 WASH6PQ9NQA3 447 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 PRDM8Q9NQV8 689 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 ZDHHC3Q9NYG2 299 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 RNF14Q9UBS8 474 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.32
MDC1-206ENST00000489540 TRBV23OR9-2A0A075B6M9 112 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 TRBV5-4A0A0C4DH59 114 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 PRR19A6NJB7 356 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 TMX2-CTNND1H3BSU7 103 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 PPM1DO15297 605 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 EML2O95834 649 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 ALDH4A1P30038 563 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 VPS41P49754 854 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 CTSCP53634 463 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 SESN2P58004 480 aaPredicted RBP17.07■□□□□ 0.32
MDC1-206ENST00000489540 CLPPQ16740 277 aaPredicted RBP17.07■□□□□ 0.32
MDC1-206ENST00000489540 FNBP1LQ5T0N5 605 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 ABRAXAS1Q6UWZ7 409 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 CREG2Q8IUH2 290 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 KDF1Q8NAX2 398 aaPredicted RBP17.07■□□□□ 0.32
MDC1-206ENST00000489540 SLC37A2Q8TED4 501 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 SGF29Q96ES7 293 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 SYNDIG1Q9H7V2 258 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 SARS2Q9NP81 518 aaKnown RBP17.07■□□□□ 0.32
MDC1-206ENST00000489540 DNAJC16Q9Y2G8 782 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
MDC1-206ENST00000489540 TPRP12270 2363 aaKnown RBP17.07■□□□□ 0.32
MDC1-206ENST00000489540 A0A1W2PQM1 296 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 OR2AG2A6NM03 316 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 B4GAT1O43505 415 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms