RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LIMK2P53671 638 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 KIF5AQ12840 1032 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 COL9A2Q14055 689 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 SPARCL1Q14515 664 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 PDPK2PQ6A1A2 396 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 ITPRIPL1Q6GPH6 555 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 LRRTM4Q86VH4 590 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 ZFAND4Q86XD8 727 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 TRAPPC5Q8IUR0 188 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 TAB3Q8N5C8 712 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 CALR3Q96L12 384 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 SRPK1Q96SB4 655 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 TRABDQ9H4I3 376 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 SARS2Q9NP81 518 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 CPNE7Q9UBL6 633 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 R3HDM2Q9Y2K5 976 aaKnown RBP13.82□□□□□ -0.2
VTI1A-206ENST00000489142 PKP3Q9Y446 797 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 PCDHGA7Q9Y5G6 932 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 ATMQ13315 3056 aa13.82□□□□□ -0.2
VTI1A-206ENST00000489142 GLYATL1P3A0A0U1RQE8 302 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 PDZK1P1A8MUH7 402 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 GAPDHSO14556 408 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 KMOO15229 486 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 DDX3YO15523 660 aaKnown RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 ZW10O43264 779 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 DUX1O43812 170 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 ANXA9O76027 345 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 TJP3O95049 919 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 THRAP10827 490 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 FGF3P11487 239 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 PBLDP30039 288 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 ADRA1AP35348 466 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 MLLT3P42568 568 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 CTSCP53634 463 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 DRG2P55039 364 aaKnown RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 SLC9B2Q86UD5 537 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 UBL4BQ8N7F7 174 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 OR10G6Q8NH81 332 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 JPH3Q8WXH2 748 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 SPATA13Q96N96 652 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 VPS35Q96QK1 796 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 UBL7Q96S82 380 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-206ENST00000489142 HACD3Q9P035 362 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 KLHL3Q9UH77 587 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 EFR3BQ9Y2G0 817 aa13.81□□□□□ -0.2
VTI1A-206ENST00000489142 OR2AG2A6NM03 316 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 OR52A4PA6NMU1 304 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 CCL22O00626 93 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 STX7O15400 261 aaKnown RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 VEGFDO43915 354 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 STK10O94804 968 aaKnown RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 BRAFP15056 766 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 CETN2P41208 172 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 UCNP55089 124 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 UBE2IP63279 158 aaKnown RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 GPLD1P80108 840 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 GTF2H3Q13889 308 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 KIAA1614Q5VZ46 1190 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 TMEM71Q6P5X7 295 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 DET1Q7L5Y6 550 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 C11orf96Q7Z7L8 435 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 VASH2Q86V25 355 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 FAM129CQ86XR2 697 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 RASGEF1AQ8N9B8 481 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 NCSTNQ92542 709 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 TMEM159Q96B96 161 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 FERMT1Q9BQL6 677 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 STN1Q9H668 368 aaKnown RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 OCIAD1Q9NX40 245 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 AKAP7Q9P0M2 348 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 ZNF624Q9P2J8 865 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-206ENST00000489142 FKBPLQ9UIM3 349 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 AHCTF1Q8WYP5 2266 aa13.8□□□□□ -0.2
VTI1A-206ENST00000489142 KIR2DS5A0A0G2JLQ3 304 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 A0A0G2JNG1 304 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 EIF4E1BA6NMX2 242 aaKnown RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 EFCAB7A8K855 629 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 GPR89AB7ZAQ6 455 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 KIR2DS3K7RE56 304 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 NVLO15381 856 aaKnown RBP13.79□□□□□ -0.2
VTI1A-206ENST00000489142 EFSO43281 561 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 PRAMEF1O95521 474 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 GPR89BP0CG08 455 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 SLC2A4P14672 509 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 TYRP1P17643 537 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 ARSDP51689 593 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 GDF10P55107 478 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 PRPSAP1Q14558 356 aa13.79□□□□□ -0.2
VTI1A-206ENST00000489142 KIR2DS5Q14953 304 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms